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Aliases for MORC2-AS1 Gene

Subcategory (RNA class) for MORC2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MORC2-AS1 Gene

  • MORC2 Antisense RNA 1 2 3 5
  • MORC2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Chromosome 22 Open Reading Frame 27 2
  • Non-Protein Coding RNA 325 2
  • NCRNA00325 3
  • C22orf27 3

External Ids for MORC2-AS1 Gene

Previous HGNC Symbols for MORC2-AS1 Gene

  • C22orf27
  • NCRNA00325

Previous GeneCards Identifiers for MORC2-AS1 Gene

  • GC22P031319
  • GC22P031323
  • GC22P031325

Summaries for MORC2-AS1 Gene

GeneCards Summary for MORC2-AS1 Gene

MORC2-AS1 (MORC2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MORC2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MORC2-AS1 Gene

Genomics for MORC2-AS1 Gene

Regulatory Elements for MORC2-AS1 Gene

Enhancers for MORC2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22H031052 1.3 Ensembl ENCODE 17.1 +132.6 132648 4 PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9 ENSG00000223831 SELENOM MORC2-AS1 INPP5J ENSG00000214125 ENSG00000227813 RN7SL305P LOC105372988 LINC02558 RPS3AP51
GH22H030828 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.4 -91.2 -91189 4 TBP MXI1 JUN MAX SIN3A RAD21 BRCA1 RFX5 E2F1 POLR2A MORC2-AS1 MORC2 SLC35E4 DUSP18 OSBP2 LOC105372994 MIR3200
GH22H030944 0.7 ENCODE 22.4 +24.5 24481 3 CTCF ZNF654 TRIM22 REST RAD21 ZFP69B GATA3 SMC3 MLLT1 PRDM1 MORC2-AS1 MORC2 TUG1 SMTN PES1 TCN2 ENSG00000223831 OSBP2 PIR35344
GH22H030921 0.8 ENCODE 13.9 -0.1 -124 1 RB1 MAX E2F1 POLR2A SCRT2 ZNF143 RUNX3 CREM CHD2 SMARCA5 MORC2-AS1 EIF4HP2 GC22M030911
GH22H031038 0.9 Ensembl ENCODE 10.8 +117.4 117414 3 BCOR SMARCA5 ZNF280D NFIB ZMYM3 RAD21 NR2F2 ZNF121 NFIC JUND MORC2-AS1 EIF4HP2 ENSG00000278920 ENSG00000269987
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MORC2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MORC2-AS1 Gene

Chromosome:
22
Start:
30,922,308 bp from pter
End:
30,932,449 bp from pter
Size:
10,142 bases
Orientation:
Plus strand

Genomic View for MORC2-AS1 Gene

Genes around MORC2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MORC2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MORC2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MORC2-AS1 Gene

Proteins for MORC2-AS1 Gene

Post-translational modifications for MORC2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MORC2-AS1 Gene

Domains & Families for MORC2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MORC2-AS1 Gene

Function for MORC2-AS1 Gene

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for MORC2-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MORC2-AS1 Gene

Localization for MORC2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MORC2-AS1 Gene

Pathways & Interactions for MORC2-AS1 Gene

SuperPathways for MORC2-AS1 Gene

No Data Available

Interacting Proteins for MORC2-AS1 Gene

Gene Ontology (GO) - Biological Process for MORC2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MORC2-AS1 Gene

Drugs & Compounds for MORC2-AS1 Gene

No Compound Related Data Available

Transcripts for MORC2-AS1 Gene

Unigene Clusters for MORC2-AS1 Gene

MORC2 antisense RNA 1:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for MORC2-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MORC2-AS1 Gene

No ASD Table

Relevant External Links for MORC2-AS1 Gene

GeneLoc Exon Structure for
MORC2-AS1
ECgene alternative splicing isoforms for
MORC2-AS1

Expression for MORC2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MORC2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MORC2-AS1 Gene

This gene is overexpressed in Testis (x10.3).

SOURCE GeneReport for Unigene cluster for MORC2-AS1 Gene:

Hs.592202
genes like me logo Genes that share expression patterns with MORC2-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MORC2-AS1 Gene

Orthologs for MORC2-AS1 Gene

Evolution for MORC2-AS1 Gene

ENSEMBL:
Gene Tree for MORC2-AS1 (if available)
TreeFam:
Gene Tree for MORC2-AS1 (if available)

No data available for Orthologs for MORC2-AS1 Gene

Paralogs for MORC2-AS1 Gene

No data available for Paralogs for MORC2-AS1 Gene

Variants for MORC2-AS1 Gene

Sequence variations from dbSNP and Humsavar for MORC2-AS1 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type
rs1000025457 -- 30,920,615(+) CTCTC(A/T)CATGC upstream-variant-2KB
rs1000141320 -- 30,920,406(+) TTTTT(C/T)TTTTA upstream-variant-2KB
rs1000323114 -- 30,925,884(+) GATGG(C/G)GCTCA nc-transcript-variant, utr-variant-3-prime
rs1000570613 -- 30,926,222(+) TTTCC(C/T)TCAAG nc-transcript-variant, downstream-variant-500B, utr-variant-3-prime
rs1001033967 -- 30,922,055(+) TGGGC(G/T)ACAGA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MORC2-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3647569 CNV gain 21293372
nsv1110864 OTHER inversion 24896259

Relevant External Links for MORC2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MORC2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MORC2-AS1 Gene

Disorders for MORC2-AS1 Gene

Relevant External Links for MORC2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MORC2-AS1

No disorders were found for MORC2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MORC2-AS1 Gene

Publications for MORC2-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 60
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for MORC2-AS1 Gene

Sources for MORC2-AS1 Gene

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