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Aliases for MNX1-AS2 Gene

Subcategory (RNA class) for MNX1-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MNX1-AS2 Gene

  • MNX1 Antisense RNA 2 2 3 5

External Ids for MNX1-AS2 Gene

Previous GeneCards Identifiers for MNX1-AS2 Gene

  • GC07P156812
  • GC00U934612

Summaries for MNX1-AS2 Gene

GeneCards Summary for MNX1-AS2 Gene

MNX1-AS2 (MNX1 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MNX1-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MNX1-AS2 Gene

Genomics for MNX1-AS2 Gene

Regulatory Elements for MNX1-AS2 Gene

Enhancers for MNX1-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H157027 0.9 ENCODE dbSUPER 11.5 +22.0 22032 1 PKNOX1 HLF CEBPB CEBPG ZNF843 NFIL3 ZNF121 CEBPA FOS ATF7 MNX1-AS2 NOM1 MNX1-AS1 ENSG00000236102
GH07H157158 0.7 Ensembl ENCODE 11.1 +152.8 152845 1 ZNF316 SP7 TRIM28 MNX1 MNX1-AS1 MNX1-AS2 GC07M157142 GC07P157193 GC07P157194
GH07H156931 0.7 ENCODE 10.7 -73.8 -73757 1 SOX13 PKNOX1 JUN NR3C1 FOXA1 ZNF366 SCRT2 FOXP2 PRDM1 SP7 MNX1-AS2 MNX1 MNX1-AS1 NOM1 LMBR1 LOC105375604 LOC102723795
GH07H156829 0.6 ENCODE 10 -176.0 -176000 0 SMARCE1 CEBPG DPF2 FOXA1 ZNF217 CTBP1 GATA3 FOS TRIM28 SETDB1 MNX1-AS2 MNX1 MNX1-AS1 GC07P156873 GC07M156670
GH07H156832 0.5 ENCODE 10 -173.2 -173160 0 CEBPB CEBPG ZNF24 SPI1 C7orf13 MNX1 MNX1-AS1 MNX1-AS2 GC07P156873 GC07M156670
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MNX1-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Location for MNX1-AS2 Gene

Chromosome:
7
Start:
157,005,881 bp from pter
End:
157,007,132 bp from pter
Size:
1,252 bases
Orientation:
Plus strand

Genomic View for MNX1-AS2 Gene

Genes around MNX1-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MNX1-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MNX1-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MNX1-AS2 Gene

Proteins for MNX1-AS2 Gene

Post-translational modifications for MNX1-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MNX1-AS2 Gene

Domains & Families for MNX1-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MNX1-AS2 Gene

Function for MNX1-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MNX1-AS2 Gene

Localization for MNX1-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MNX1-AS2 Gene

Pathways & Interactions for MNX1-AS2 Gene

SuperPathways for MNX1-AS2 Gene

No Data Available

Interacting Proteins for MNX1-AS2 Gene

Gene Ontology (GO) - Biological Process for MNX1-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MNX1-AS2 Gene

Drugs & Compounds for MNX1-AS2 Gene

No Compound Related Data Available

Transcripts for MNX1-AS2 Gene

mRNA/cDNA for MNX1-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MNX1-AS2 Gene

No ASD Table

Relevant External Links for MNX1-AS2 Gene

GeneLoc Exon Structure for
MNX1-AS2
ECgene alternative splicing isoforms for
MNX1-AS2

Expression for MNX1-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MNX1-AS2 Gene

genes like me logo Genes that share expression patterns with MNX1-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MNX1-AS2 Gene

Orthologs for MNX1-AS2 Gene

Evolution for MNX1-AS2 Gene

ENSEMBL:
Gene Tree for MNX1-AS2 (if available)
TreeFam:
Gene Tree for MNX1-AS2 (if available)

No data available for Orthologs for MNX1-AS2 Gene

Paralogs for MNX1-AS2 Gene

No data available for Paralogs for MNX1-AS2 Gene

Variants for MNX1-AS2 Gene

Sequence variations from dbSNP and Humsavar for MNX1-AS2 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs121912546 Pathogenic 157,006,556(-) AGCAC(C/T)AGTTC intron-variant, reference, stop-gained
rs121912548 Pathogenic 157,006,595(-) CGCGC(A/T)CCGCC intron-variant, reference, missense
rs121912549 Pathogenic 157,006,487(-) TCACC(G/T)AGACC intron-variant, reference, stop-gained
rs1000130205 -- 157,004,772(+) CAACC(A/G)CCGAG downstream-variant-500B, upstream-variant-2KB
rs1000518471 -- 157,005,041(+) GAGAC(A/G)TAAGC upstream-variant-2KB, utr-variant-3-prime

Relevant External Links for MNX1-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MNX1-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MNX1-AS2 Gene

Disorders for MNX1-AS2 Gene

Relevant External Links for MNX1-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MNX1-AS2

No disorders were found for MNX1-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MNX1-AS2 Gene

Publications for MNX1-AS2 Gene

  1. Distinct expression profiles of lncRNAs between early-onset preeclampsia and preterm controls. (PMID: 27816668) Long W … Ding H (Clinica chimica acta; international journal of clinical chemistry 2016) 2 3 60

Products for MNX1-AS2 Gene

Sources for MNX1-AS2 Gene

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