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Aliases for MMP26 Gene

Aliases for MMP26 Gene

  • Matrix Metallopeptidase 26 2 3 5
  • Matrix Metalloproteinase 26 2 3
  • Matrilysin 2 2 3
  • Matrilysin-2 3 4
  • Endometase 3 4
  • MMP-26 3 4
  • EC 3.4.24.- 4

External Ids for MMP26 Gene

Previous GeneCards Identifiers for MMP26 Gene

  • GC11P005575
  • GC11P005311
  • GC11P004968
  • GC11P004973
  • GC11P004966
  • GC11P004745
  • GC11P004726
  • GC11P004669

Summaries for MMP26 Gene

Entrez Gene Summary for MMP26 Gene

  • Proteins of the matrix metalloproteinase (MMP) family are involved in the breakdown of extracellular matrix in normal physiological processes, such as embryonic development, reproduction, and tissue remodeling, as well as in disease processes, such as arthritis and metastasis. Most MMP's are secreted as inactive proproteins which are activated when cleaved by extracellular proteinases. The encoded protein degrades type IV collagen, fibronectin, fibrinogen, casein, vitronectin, alpha 1-antitrypsin, alpha 2-macroglobulin, and insulin-like growth factor-binding protein 1, and activates MMP9 by cleavage. The protein differs from most MMP family members in that it lacks a conserved C-terminal protein domain. [provided by RefSeq, Jul 2008]

GeneCards Summary for MMP26 Gene

MMP26 (Matrix Metallopeptidase 26) is a Protein Coding gene. Diseases associated with MMP26 include endometrial cancer. Among its related pathways are Matrix Metalloproteinases and GPCR Pathway. GO annotations related to this gene include metalloendopeptidase activity and metallopeptidase activity. An important paralog of this gene is MMP19.

UniProtKB/Swiss-Prot for MMP26 Gene

  • May hydrolyze collagen type IV, fibronectin, fibrinogen, beta-casein, type I gelatin and alpha-1 proteinase inhibitor. Is also able to activate progelatinase B.

Tocris Summary for MMP26 Gene

  • Matrix metalloproteases (matrix metalloproteinase, MMPs), also called matrixins, are zinc-dependent endopeptidases and the major proteases in ECM degradation. MMPs are capable of degrading several extracellular molecules and a number of bioactive molecules.

Gene Wiki entry for MMP26 Gene

No data available for PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MMP26 Gene

Genomics for MMP26 Gene

Regulatory Elements for MMP26 Gene

Enhancers for MMP26 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around MMP26 on UCSC Golden Path with GeneCards custom track

Genomic Location for MMP26 Gene

Chromosome:
11
Start:
4,704,927 bp from pter
End:
4,992,429 bp from pter
Size:
287,503 bases
Orientation:
Plus strand

Genomic View for MMP26 Gene

Genes around MMP26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MMP26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MMP26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MMP26 Gene

Proteins for MMP26 Gene

  • Protein details for MMP26 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NRE1-MMP26_HUMAN
    Recommended name:
    Matrix metalloproteinase-26
    Protein Accession:
    Q9NRE1
    Secondary Accessions:
    • Q3MJ78
    • Q9GZS2
    • Q9NR87

    Protein attributes for MMP26 Gene

    Size:
    261 amino acids
    Molecular mass:
    29708 Da
    Cofactor:
    Name=Ca(2+); Xref=ChEBI:CHEBI:29108;
    Cofactor:
    Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
    Quaternary structure:
    No Data Available

neXtProt entry for MMP26 Gene

Proteomics data for MMP26 Gene at MOPED

Post-translational modifications for MMP26 Gene

  • Glycosylation at Asn 64 and Asn 221
  • Modification sites at PhosphoSitePlus

Other Protein References for MMP26 Gene

ENSEMBL proteins:
REFSEQ proteins:

Antibody Products

No data available for DME Specific Peptides for MMP26 Gene

Domains & Families for MMP26 Gene

Gene Families for MMP26 Gene

Protein Domains for MMP26 Gene

Suggested Antigen Peptide Sequences for MMP26 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9NRE1

UniProtKB/Swiss-Prot:

MMP26_HUMAN :
  • The conserved cysteine present in the cysteine-switch motif binds the catalytic zinc ion, thus inhibiting the enzyme. The dissociation of the cysteine from the zinc ion upon the activation-peptide release activates the enzyme.
  • Belongs to the peptidase M10A family.
Domain:
  • The conserved cysteine present in the cysteine-switch motif binds the catalytic zinc ion, thus inhibiting the enzyme. The dissociation of the cysteine from the zinc ion upon the activation-peptide release activates the enzyme.
Family:
  • Belongs to the peptidase M10A family.
genes like me logo Genes that share domains with MMP26: view

Function for MMP26 Gene

Molecular function for MMP26 Gene

UniProtKB/Swiss-Prot Function:
May hydrolyze collagen type IV, fibronectin, fibrinogen, beta-casein, type I gelatin and alpha-1 proteinase inhibitor. Is also able to activate progelatinase B.

Enzyme Numbers (IUBMB) for MMP26 Gene

Gene Ontology (GO) - Molecular Function for MMP26 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004222 metalloendopeptidase activity IEA --
genes like me logo Genes that share ontologies with MMP26: view
genes like me logo Genes that share phenotypes with MMP26: view

Animal Model Products

CRISPR Products

miRNA for MMP26 Gene

miRTarBase miRNAs that target MMP26

No data available for Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for MMP26 Gene

Localization for MMP26 Gene

Subcellular locations from UniProtKB/Swiss-Prot for MMP26 Gene

Secreted, extracellular space, extracellular matrix.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for MMP26 Gene COMPARTMENTS Subcellular localization image for MMP26 gene
Compartment Confidence
extracellular 5
plasma membrane 3
endoplasmic reticulum 1
lysosome 1
peroxisome 1
vacuole 1

No data available for Gene Ontology (GO) - Cellular Components for MMP26 Gene

Pathways & Interactions for MMP26 Gene

genes like me logo Genes that share pathways with MMP26: view

Pathways by source for MMP26 Gene

1 GeneTex pathway for MMP26 Gene
1 BioSystems pathway for MMP26 Gene

Gene Ontology (GO) - Biological Process for MMP26 Gene

None

No data available for SIGNOR curated interactions for MMP26 Gene

Drugs & Compounds for MMP26 Gene

(6) Drugs for MMP26 Gene - From: DrugBank, HMDB, Tocris, and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Marimastat Approved, Investigational Pharma Target, inhibitor MMPs inhibitor,board spectrum, Broad spectrum MMP inhibitor 4
calcium Nutra 0

(6) Additional Compounds for MMP26 Gene - From: Novoseek and Tocris

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
ARP 100
704888-90-4
ARP 101
849773-63-3
ONO 4817
223472-31-9
PD 166793
199850-67-4

(5) Tocris Compounds for MMP26 Gene

Compound Action Cas Number
ARP 100 Selective inhibitor of MMP-2 704888-90-4
ARP 101 Inhibitor of MMP-2 849773-63-3
Marimastat Broad spectrum MMP inhibitor 154039-60-8
ONO 4817 Broad spectrum MMP inhibitor 223472-31-9
PD 166793 Broad spectrum MMP inhibitor 199850-67-4
genes like me logo Genes that share compounds with MMP26: view

Transcripts for MMP26 Gene

mRNA/cDNA for MMP26 Gene

(2) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(14) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MMP26 Gene

Matrix metallopeptidase 26:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MMP26 Gene

No ASD Table

Relevant External Links for MMP26 Gene

GeneLoc Exon Structure for
MMP26
ECgene alternative splicing isoforms for
MMP26

Expression for MMP26 Gene

mRNA expression in normal human tissues for MMP26 Gene

mRNA differential expression in normal tissues according to GTEx for MMP26 Gene

This gene is overexpressed in Uterus (x26.4), Prostate (x17.0), and Testis (x5.2).

SOURCE GeneReport for Unigene cluster for MMP26 Gene Hs.204732

mRNA Expression by UniProt/SwissProt for MMP26 Gene

Q9NRE1-MMP26_HUMAN
Tissue specificity: Expressed specifically in uterus and placenta. Is also widely expressed in malignant tumors from different sources as well as in diverse tumor cell lines.
genes like me logo Genes that share expression patterns with MMP26: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression and Protein tissue co-expression partners for MMP26 Gene

Orthologs for MMP26 Gene

This gene was present in the common ancestor of animals.

Orthologs for MMP26 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia MMP26 35
  • 78.67 (n)
  • 67.05 (a)
MMP26 36
  • 67 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia MMP26 35
  • 98.98 (n)
  • 97.32 (a)
MMP26 36
  • 97 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 43 (a)
OneToMany
-- 36
  • 34 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 42 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii MMP26 36
  • 37 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea H19M22.3 36
  • 13 (a)
ManyToMany
zmp-1 36
  • 9 (a)
ManyToMany
Species with no ortholog for MMP26:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for MMP26 Gene

ENSEMBL:
Gene Tree for MMP26 (if available)
TreeFam:
Gene Tree for MMP26 (if available)

Paralogs for MMP26 Gene

Paralogs for MMP26 Gene

(18) SIMAP similar genes for MMP26 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with MMP26: view

Variants for MMP26 Gene

Sequence variations from dbSNP and Humsavar for MMP26 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs2499953 - 4,989,675(+) TGACC(A/G/T)AGAAG reference, missense, utr-variant-5-prime
rs16908114 - 4,992,236(+) GACAT(A/G)CCTTA reference, missense
rs1463369 -- 4,990,265(+) ATTTA(C/T)GTAGA intron-variant
rs1973075 -- 4,991,027(+) ATGCT(A/G/T)TTCAA intron-variant
rs61751340 -- 4,991,416(+) CTTAG(A/G)CCATG reference, missense

Structural Variations from Database of Genomic Variants (DGV) for MMP26 Gene

Variant ID Type Subtype PubMed ID
dgv340e1 CNV Complex 17122850
nsv526998 CNV Loss 19592680
nsv510237 CNV Loss 20534489

Variation tolerance for MMP26 Gene

Residual Variation Intolerance Score: 80.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.80; 73.70% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for MMP26 Gene

HapMap Linkage Disequilibrium report
MMP26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MMP26 Gene

Disorders for MMP26 Gene

MalaCards: The human disease database

(1) MalaCards diseases for MMP26 Gene - From: DISEASES, Novoseek, and GeneCards

Disorder Aliases PubMed IDs
endometrial cancer
  • endometrial cancer, familial
- elite association - COSMIC cancer census association via MalaCards
Search MMP26 in MalaCards View complete list of genes associated with diseases

Relevant External Links for MMP26

Genetic Association Database (GAD)
MMP26
Human Genome Epidemiology (HuGE) Navigator
MMP26
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MMP26
genes like me logo Genes that share disorders with MMP26: view

No data available for UniProtKB/Swiss-Prot and Genatlas for MMP26 Gene

Publications for MMP26 Gene

  1. Identification and characterization of Homo sapiens endometase (matrix metalloproteinase-26) from endometrial tumor. (PMID: 10801841) Park H.I. … Sang Q.-X.A. (J. Biol. Chem. 2000) 2 3 4 23 67
  2. Cloning of MMP-26 A novel matrilysin-like proteinase. (PMID: 10824119) Begnoit de Coignac A. … Gauchat J.-F. (Eur. J. Biochem. 2000) 2 3 23
  3. Expression of Matrix Metalloproteinase-26 promotes human glioma U251 cell invasion in vitro and in vivo. (PMID: 19956866) Deng Y. … Li Y. (Oncol. Rep. 2010) 3 23
  4. GnRH I and II up-regulate MMP-26 expression through the JNK pathway in human cytotrophoblasts. (PMID: 20074375) Liu J. … Wang Y.L. (Reprod. Biol. Endocrinol. 2010) 3 23
  5. Expression and clinical significance of matrix metalloproteinase (MMP)-26 protein in non-small cell lung cancer. (PMID: 19448419) Li L. … Zhang X.G. (Ai Zheng 2009) 3 23

Products for MMP26 Gene

Sources for MMP26 Gene

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