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Aliases for MMP24-AS1 Gene

Subcategory (RNA class) for MMP24-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MMP24-AS1 Gene

  • MMP24 Antisense RNA 1 2 3 5

External Ids for MMP24-AS1 Gene

Previous GeneCards Identifiers for MMP24-AS1 Gene

  • GC20M033804

Summaries for MMP24-AS1 Gene

GeneCards Summary for MMP24-AS1 Gene

MMP24-AS1 (MMP24 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MMP24-AS1 Gene

Genomics for MMP24-AS1 Gene

Regulatory Elements for MMP24-AS1 Gene

Promoters for MMP24-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around MMP24-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MMP24-AS1 Gene

Chromosome:
20
Start:
35,201,745 bp from pter
End:
35,278,157 bp from pter
Size:
76,413 bases
Orientation:
Minus strand

Genomic View for MMP24-AS1 Gene

Genes around MMP24-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MMP24-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MMP24-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MMP24-AS1 Gene

Proteins for MMP24-AS1 Gene

  • Protein details for MMP24-AS1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0U1RRL7
    Recommended name:
    Protein MMP24-AS1
    Protein Accession:
    A0A0U1RRL7

    Protein attributes for MMP24-AS1 Gene

    Size:
    71 amino acids
    Molecular mass:
    7680 Da
    Quaternary structure:
    No Data Available

neXtProt entry for MMP24-AS1 Gene

Proteomics data for MMP24-AS1 Gene at MOPED

Post-translational modifications for MMP24-AS1 Gene

No Post-translational modifications

Other Protein References for MMP24-AS1 Gene

No data available for DME Specific Peptides for MMP24-AS1 Gene

Domains & Families for MMP24-AS1 Gene

Protein Domains for MMP24-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MMP24-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MMP24-AS1 Gene

Function for MMP24-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MMP24-AS1 Gene

Localization for MMP24-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MMP24-AS1 Gene

Pathways & Interactions for MMP24-AS1 Gene

SuperPathways for MMP24-AS1 Gene

No Data Available

Interacting Proteins for MMP24-AS1 Gene

Gene Ontology (GO) - Biological Process for MMP24-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MMP24-AS1 Gene

Drugs & Compounds for MMP24-AS1 Gene

No Compound Related Data Available

Transcripts for MMP24-AS1 Gene

mRNA/cDNA for MMP24-AS1 Gene

(12) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MMP24-AS1 Gene

No ASD Table

Relevant External Links for MMP24-AS1 Gene

GeneLoc Exon Structure for
MMP24-AS1
ECgene alternative splicing isoforms for
MMP24-AS1

Expression for MMP24-AS1 Gene

mRNA expression in normal human tissues for MMP24-AS1 Gene

genes like me logo Genes that share expression patterns with MMP24-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MMP24-AS1 Gene

Orthologs for MMP24-AS1 Gene

Evolution for MMP24-AS1 Gene

ENSEMBL:
Gene Tree for MMP24-AS1 (if available)
TreeFam:
Gene Tree for MMP24-AS1 (if available)

No data available for Orthologs for MMP24-AS1 Gene

Paralogs for MMP24-AS1 Gene

No data available for Paralogs for MMP24-AS1 Gene

Variants for MMP24-AS1 Gene

Sequence variations from dbSNP and Humsavar for MMP24-AS1 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
rs181462441 -- 35,278,269(+) TGGGA(A/T)CCCGC upstream-variant-2KB
rs551070641 -- 35,278,371(+) ACAGG(C/G)GACTT upstream-variant-2KB
rs562277968 -- 35,278,200(+) GGCCC(C/G)GCCCC upstream-variant-2KB
rs577395162 -- 35,278,220(+) GACGG(A/C)ATGCA upstream-variant-2KB
rs747469019 -- 35,278,312(+) TGCAA(C/T)CTCCA upstream-variant-2KB

Relevant External Links for MMP24-AS1 Gene

HapMap Linkage Disequilibrium report
MMP24-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MMP24-AS1 Gene

Disorders for MMP24-AS1 Gene

Relevant External Links for MMP24-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MMP24-AS1

No disorders were found for MMP24-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MMP24-AS1 Gene

Publications for MMP24-AS1 Gene

  1. Web-based, participant-driven studies yield novel genetic associations for common traits. (PMID: 20585627) Eriksson N. … Mountain J. (PLoS Genet. 2010) 3 67
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3

Products for MMP24-AS1 Gene

Sources for MMP24-AS1 Gene

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