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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

MMGT1 Gene

protein-coding   GIFtS: 43
GCID: GC0XM135045

membrane magnesium transporter 1

(Previous name: transmembrane protein 32 )
(Previous symbol: TMEM32)
  Search for MMGT1
in our new
 Human Malady Compendium 
Biological research products
for MMGT1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Membrane Magnesium Transporter 11 2
Transmembrane Protein 321 2 3
EMC51 2 3
TMEM321 2 3
ER Membrane Protein Complex Subunit 52 3

External Ids:    HGNC: 281001   Entrez Gene: 933802   Ensembl: ENSG000001694467   UniProtKB: Q8N4V13   

Export aliases for MMGT1 gene to outside databases

Previous GC identifers: GC0XM134872 GC0XM124318


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: MMGT1_HUMAN, Q8N4V1
Function: Mediates Mg(2+) transport (By similarity)




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000023.10  NC_018934.1  NT_011786.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the MMGT1 gene promoter:
         ATF-2   CUTL1   POU6F1 (c2)   HNF-3beta   LCR-F1   Gfi-1   Evi-1   c-Ets-1   AREB6   STAT3   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidMMGT1 promoter sequence
   Search SABiosciences Chromatin IP Primers for MMGT1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat MMGT1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: Xq26.3   Ensembl cytogenetic band:  Xq26.3   HGNC cytogenetic band: Xq26.3

MMGT1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
MMGT1 gene location

GeneLoc information about chromosome X         GeneLoc Exon Structure

GeneLoc location for GC0XM135045:  view genomic region     (about GC identifiers)

Start:
135,044,229 bp from pter      End:
135,056,222 bp from pter
Size:
11,994 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: MMGT1_HUMAN, Q8N4V1 (See protein sequence)
Recommended Name: Membrane magnesium transporter 1 precursor  
Size: 131 amino acids; 14686 Da
Subunit: Component of the ER membrane protein complex (EMC)
Subcellular location: Endoplasmic reticulum membrane; Single-pass type I membrane protein. Golgi apparatus membrane;
Single-pass type I membrane protein (By similarity). Early endosome membrane; Single-pass type I membrane protein (By
similarity). Note=Detected in the Golgi apparatus and in post-Golgi vesicles including early endosomes (By similarity)
Secondary accessions: B2R625 B4DIY3 D3DWG7 Q5JPP7
Alternative splicing: 2 isoforms:  Q8N4V1-1   Q8N4V1-2   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for MMGT1: NX_Q8N4V1

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q8N4V1

  • MMGT1 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_775741.1  
    ENSEMBL proteins: 
     ENSP00000306220   ENSP00000411359  

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    Uscn Proteins for MMGT1

    Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000139Golgi membrane IEA--
    GO:0005769early endosome ISS--
    GO:0005794Golgi apparatus ISS--
    GO:0005886plasma membrane IEA--
    GO:0016021integral to membrane IDA--


    MMGT1 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    MMGT1 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR018937 Magnesium_transport

    Graphical View of Domain Structure for InterPro Entry Q8N4V1

    ProtoNet protein and cluster: Q8N4V1

    UniProtKB/Swiss-Prot: MMGT1_HUMAN, Q8N4V1
    Similarity: Belongs to the membrane magnesium transporter (TC 1.A.67) family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: MMGT1_HUMAN, Q8N4V1
    Function: Mediates Mg(2+) transport (By similarity)

    miRNA
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    Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005375copper ion transmembrane transporter activity IEA--
    GO:0005384manganese ion transmembrane transporter activity IEA--
    GO:0015087cobalt ion transmembrane transporter activity IEA--
    GO:0015095magnesium ion transmembrane transporter activity ISS--
    GO:0015099nickel cation transmembrane transporter activity IEA--


    MMGT1 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for MMGT1:
     Increased gamma-H2AX phosphory 


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for MMGT1

    STRING Interaction Network Preview (showing 2 interactants - click image to see more details)

    2 Interacting proteins for MMGT1 (ENSP000003062204) via UniProtKB, MINT, STRING, and/or I2D
    InteractantInteraction Details
    GeneCardExternal ID(s)
    UBCENSP000003448184STRING: ENSP00000344818
    ELAVL1ENSP000003852694STRING: ENSP00000385269
    About this table

    Gene Ontology (GO): 1 biological process term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0015693magnesium ion transport ISS--


    MMGT1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for MMGT1
    Search CenterWatch for drugs/clinical trials and news about MMGT1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for MMGT1 gene: 
    NM_173470.1  

    Unigene Cluster for MMGT1:

    Membrane magnesium transporter 1
    Hs.110702  [show with all ESTs]
    Unigene Representative Sequence: NM_173470
    2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000305963(uc022cet.1 uc004ezi.1 uc011mvw.1) ENST00000433339


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    hsa-miR-124* hsa-miR-3938 hsa-miR-300 hsa-miR-16-1* hsa-miR-301a hsa-miR-4267 hsa-miR-4273 hsa-miR-130b
    Browse SwitchGear 3'UTR luciferase reporter plasmids
    Inhib. RNA
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    Browse for Gene Knock-down Tools from EMD Millipore
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    OriGene siRNA: MMGT1
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    Clone
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    Additional cDNA sequence: 

    AK295829.1 AK312409.1 AL157477.1 BC033588.1 

    7 DOTS entries:

    DT.113468  DT.97843130  DT.95372910  DT.95372913  DT.101960709  DT.75102838  DT.91728590 

    24/153 AceView cDNA sequences (see all 153):

    CD675144 AI418501 CK819984 AA251452 AA126085 BM970040 BC033588 BU177058 
    AI264186 BF435985 CB131193 CD723453 BQ003522 BQ425704 AA311076 BM273278 
    BM698421 CF265192 BE542759 BM664568 CB306478 AW103391 NM_173470 AA370068 

    GeneLoc Exon Structure

    3 Alternative Splicing Database (ASD) splice patterns (SP) for MMGT1    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4a · 4b
    SP1:                                          
    SP2:                    -     -               
    SP3:              -                           


    ECgene alternative splicing isoforms for MMGT1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    MMGT1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: ATGTATTGAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See MMGT1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for MMGT1

    SOURCE GeneReport for Unigene cluster: Hs.110702
        SABiosciences Custom PCR Arrays for MMGT1
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MMGT1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for MMGT1 gene from 7/21 species (see all 21)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Mmgt11 , 5 membrane magnesium transporter 11, 5 90.59(n)1
    95.42(a)1
      X (30.06 cM)5
    2367921  NM_146234.31  NP_666346.11 
     565855125 
    chicken
    (Gallus gallus)
    Aves MMGT11 membrane magnesium transporter 1 82.56(n)
    92.31(a)
      422240  XM_420228.3  XP_420228.1 
    lizard
    (Anolis carolinensis)
    Reptilia MMGT16
    --
    65(a)
    1 ↔ 1
    GL343761.1(50045-55326)
    African clawed frog
    (Xenopus laevis)
    Amphibia BC044280.12   -- 80.19(n)    BC044280.1 
    zebrafish
    (Danio rerio)
    Actinopterygii AY394962.12   -- 72.87(n)    AY394962.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG151681 CG15168 54.61(n)
    56.38(a)
      35159  NM_136082.3  NP_609926.1 
    worm
    (Caenorhabditis elegans)
    Secernentea B0334.156
    --
    25(a)
    1 ↔ 1
    II(11496714-11497996)


    ENSEMBL Gene Tree for MMGT1 (if available)
    TreeFam Gene Tree for MMGT1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/122 NCBI SNPs in MMGT1 are shown (see all 122    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr X posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1841698441,2
    --135043790(+) AATACC/TGTAGA 1 -- int10--------
    rs1899328901,2
    --135043795(+) TGTAGA/GTAAGT 1 -- int10--------
    rs1813671401,2
    --135044136(+) CAGTCA/GTAAAA 1 -- int10--------
    rs1399688201,2
    --135044250(+) CATTTA/GTTTAT 1 -- ut310--------
    rs1114884501,2
    C,--135044294(+) ATATCC/GCAAAA 1 -- ut310--------
    rs413045281,2
    C,--135044646(+) AATAAC/TTGACT 1 -- ut310--------
    rs1856421541,2
    --135044697(+) TTAGCA/GGTGTT 1 -- ut310--------
    rs1892284631,2
    --135044815(+) AGGTAC/TACAAG 1 -- ut310--------
    rs1815864961,2
    --135044928(+) CTCTTA/CCCGAC 1 -- ut310--------
    rs1407351421,2
    --135044983(+) GTATTA/TTAAGT 1 -- ut310--------

    HapMap Linkage Disequilibrium report for MMGT1 (135044229 - 135056222 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for MMGT1
         1 CNV: 4174

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section
      --

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for MMGT1 gene, integrated from 9 sources (see all 21):
    (articles sorted by number of sources associating them with MMGT1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Defining human ERAD networks through an integrative mapping strategy. (PubMed id 22119785)1, 2, 3 Christianson J.C.... Kopito R.R. (2012)
    2. Identification and characterization of a novel family of membrane magnesium transporters, MMgT1 and MMgT2. (PubMed id 18057121)1, 3 Goytain A. and Quamme G.A. (2008)
    3. Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing. (PubMed id 11256614)1, 2 Simpson J.C.... Wiemann S. (2000)
    4. A census of human soluble protein complexes. (PubMed id 22939629)1 Havugimana P.C....Emili A. (2012)
    5. Global landscape of HIV-human protein complexes. (PubMed id 22190034)1 Jager S....Krogan N.J. (2012)
    6. Methods for quantification of in vivo changes in prote in ubiquitination following proteasome and deubiquitinase inhibition. (PubMed id 22505724)1 Udeshi N.D....Carr S.A. (2012)
    7. Initial characterization of the human central proteome. (PubMed id 21269460)2 Burkard T.R.... Colinge J. (2011)
    8. A proteome-wide, quantitative survey of in vivo ubiqui tylation sites reveals widespread regulatory roles. (PubMed id 21890473)1 Wagner S.A....Choudhary C. (2011)
    9. Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (2011)
    10. Interactions of pathological hallmark proteins: tubul in polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PubMed id 21832049)1 OlA!h J....OvA!di J. (2011)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 93380 HGNC: 28100 AceView: TMEM32 Ensembl:ENSG00000169446 euGenes: HUgn93380
    ECgene: MMGT1 H-InvDB: MMGT1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for MMGT1 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for MMGT1 gene:
    Search GeneIP for patents involving MMGT1

    GeneCards and IP:
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    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
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     MMGT1 Proteins, Antibodies, CLIAs, and ELISAs
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