MLKL Gene
protein-coding GIFtS : 53
GCID: GC16 M074705
mixed lineage kinase domain-like
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Aliasesfor MLKL gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Mixed Lineage Kinase Domain-Like 1 2 FLJ343891 Mixed Lineage Kinase Domain-Like Protein2
Export aliases for MLKL gene to outside databases Previous GC identifers: GC16M073264 GC16M060455
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Summariesfor MLKL gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: MLKL_HUMAN, Q8NB16 Function : Required for the execution of programmed necrosis
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Genomic Viewsfor MLKL gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000016.9 NC_018927.1 NT_010498.15 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the MLKL gene promoter: TBP AML1a POU6F1 (c2) E4BP4 C/EBPalpha Evi-1 CREB NRF-2 deltaCREB En-1 Other transcription factors Search SABiosciences Chromatin IP Primers for MLKL Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MLKL
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 16q23.1 Ensembl cytogenetic band: 16q23.1 HGNC cytogenetic band: 16q22.3 MLKL Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 16 GeneLoc Exon Structure
GeneLoc location for GC16M074705: view genomic region
(about GC identifiers )
Start:
74,705,753 bp from pter
End:
74,734,858 bp from pter
Size:
29,106 bases
Orientation:
minus strand
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Proteinsfor MLKL gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: MLKL_HUMAN, Q8NB16 (See
protein sequence )Recommended Name: Mixed lineage kinase domain-like protein Size : 471 amino acids; 54479 Da
Subunit : Upon TNF-induced necrosis, forms in complex with PGAM5, RIPK1 and RIPK3. Within this complex, may play a rolein the proper targeting of RIPK1/RIPK3 to its downstream effector PGAM5
Secondary accessions : A6NCE4 Q8N6V0Alternative splicing : 2 isoforms : Q8NB16-1 Q8NB16-2 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for MLKL: NX_Q8NB16 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q8NB16 MLKL Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (2 alternative transcripts):
NP_001135969.1 NP_689862.1 ENSEMBL proteins: ENSP00000303118 ENSP00000308351 ENSP00000459935 ENSP00000461110 ENSP00000459920 ENSP00000461666 Human Recombinant Protein Products: MLKL Antibody Products: Assay Products for MLKL:
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Protein
Domains / Familiesfor MLKL gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
MLKL for domains About GeneDecksing 3 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry Q8NB16 ProtoNet protein and cluster: Q8NB16
UniProtKB/Swiss-Prot: MLKL_HUMAN, Q8NB16 Domain : The protein kinase domain is predicted to be catalytically inactiveSimilarity : Belongs to the protein kinase superfamilySimilarity : Contains 1 protein kinase domain
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Functionfor MLKL gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: MLKL_HUMAN, Q8NB16 Function : Required for the execution of programmed necrosis
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MLKL (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MLKL (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): MLKL (NM_152649 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MLKL Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MLKL
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MLKL
Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view) : About this table
MLKL for ontologies About GeneDecksing 6 GenomeRNAi human phenotypes for MLKL :
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Pathways & Interactionsfor MLKL gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 Wnt Signaling Pathway
1 BioSystems Pathway for MLKL Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for MLKL STRING Interaction
Network Preview (showing 5 interactants - click image to see 9)5/565 Interacting proteins for MLKL (Q8NB16 1 , 2 , 3 ENSP00000308351 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 565 )About this table
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Drugs & Compoundsfor MLKL gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for MLKL 2 HMDB Compounds for MLKL About this table Search CenterWatch for drugs/clinical trials and news about MLKL
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Transcriptsfor MLKL gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for MLKL gene (2 alternative transcripts): NM_001142497.1 NM_152649.2 Unigene Cluster for MLKL:
Mixed lineage kinase domain-like Hs.119878 [show with all ESTs ] Unigene Representative Sequence: AK122998 8 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000306247 ENST00000575695 ENST00000570846 ENST00000308807 (uc002fdb.2 uc002fdc.2 )ENST00000576529 ENST00000571303 ENST00000573267 ENST00000575686 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MLKL (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MLKL (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): MLKL (NM_152649 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MLKL Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MLKL
Additional cDNA sequence: AK091708.1 AK093013.1 AK122998.1 AL833362.1 BC028141.1
7 DOTS entries : DT.100649024 DT.409298
DT.100025407 DT.421346 DT.100649026 DT.101985719 DT.75157785 24/64 AceView cDNA sequences (see all 64 ):
BC028141 CR607857 CA487359 BP345323 CB069503 BQ575071 CA487239 AW963910 BQ709249 CR595250 AA706818 AL833362 AA582672 CB159407 BX352121 BX384496 AA307123 CD516215 BX436432 AA765938 AA381661 AA381405 BX106138 AK122998 GeneLoc Exon Structure 4 Alternative Splicing Database (ASD) splice patterns (SP) for MLKL About this scheme ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b ^ 8a · 8b ^ 9a · 9b ^ 10 ^ 11 SP1 :             -   -         -       SP2 :             -                 SP3 :     -   -   -   -   -   -   -   -           SP4 :                            
ECgene alternative splicing isoforms for MLKL
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Expression for MLKL gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section MLKL expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: AATGAGGCCA
About this image MLKL expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table 1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Testis Seminiferous Tubules Spermatid Germ Cells, Male Gametocytes Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See MLKL Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for MLKL SOURCE GeneReport for Unigene cluster: Hs.119878 SABiosciences Custom PCR Arrays for MLKL Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MLKLBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat MLKL QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MLKL QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MLKL In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MLKL
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Orthologsfor MLKL gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for MLKL gene from 3/8 species (see all 8 ) About this table
ENSEMBL Gene Tree for MLKL (if available)TreeFam Gene Tree for MLKL (if available)
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Paralogsfor MLKL gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section --
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Genomic Variantsfor MLKL gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 16 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for MLKL (74705753 - 74734858 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for MLKL: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MLKL
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Disorders
/ Diseasesfor MLKL gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
MLKL for disorders About GeneDecksing 1 disease for MLKL : About MalaCards cholesterol Human Genome Epidemiology (HuGE) Navigator: MLKL (1 document)Export disorders for MLKL gene to outside databases
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Publicationsfor MLKL gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for MLKL gene, integrated from 9 sources (see all 18 ): (articles sorted by number of sources associating them with MLKL) Utopia : connect your pdf to the dynamic world of online information
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 , 2 Ota T.... Sugano S. (2004) The protein kinase complement of the human genome. (PubMed id 12471243) 1 , 2 Manning G.... Sudarsanam S. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 , 3 Strausberg R.L....Marra M.A. (2002) Mixed lineage kinase domain-like is a key receptor int eracting protein 3 downstream component of TNF-induced necrosis. (PubMed id 22421439) 1 Zhao J....Liu Z.G. (2012) Mixed lineage kinase domain-like protein mediates necr osis signaling downstream of RIP3 kinase. (PubMed id 22265413) 1 Sun L....Wang X. (2012) The mitochondrial phosphatase PGAM5 functions at the c onvergence point of multiple necrotic death pathways. (PubMed id 22265414) 2 Wang Z....Wang X. (2012) Initial characterization of the human central proteome. (PubMed id 21269460) 2 Burkard T.R.... Colinge J. (2011) Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis. (PubMed id 20068231) 2 Olsen J.V....Mann M. (2010) Fine mapping and association studies of a high-densit y lipoprotein cholesterol linkage region on chromosome 16 in French-Canadian su bjects. (PubMed id 19844255) 1 Dastani Z....Genest J. (2010)
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External Searches for MLKL gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing MLKL gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing MLKL gene
(According to HUGE )
About This Section --
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Specialized Databases showing MLKL gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for MLKL Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for MLKL gene: Search GeneIP for patents involving MLKL GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor MLKL gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for MLKL OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for MLKL OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MLKL Browse OriGene Protein Over-expression Lysates Browse OriGene Fluorogenic Cell Assay Kits Browse OriGene siRNAs OriGene 3'-UTR Clone for MLKL OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MLKL OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MLKL Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for MLKL OriGene Custom Protein Services for MLKL OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat MLKL QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MLKL QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MLKL QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat MLKL QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MLKL QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MLKL
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MLKL Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MLKL
ThermoFisher Antibodies for MLKL
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MLKL
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