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Aliases for MLIP-IT1 Gene

Subcategory (RNA class) for MLIP-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for MLIP-IT1 Gene

  • MLIP Intronic Transcript 1 2 3 5
  • MLIP Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for MLIP-IT1 Gene

Previous GeneCards Identifiers for MLIP-IT1 Gene

  • GC00U933915
  • GC06P053864

Summaries for MLIP-IT1 Gene

GeneCards Summary for MLIP-IT1 Gene

MLIP-IT1 (MLIP Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MLIP-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MLIP-IT1 Gene

Genomics for MLIP-IT1 Gene

Regulatory Elements for MLIP-IT1 Gene

Enhancers for MLIP-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H053982 0.9 Ensembl ENCODE 18 -15.3 -15251 2 JUN CEBPB EP300 JUND POLR2A STAT3 FOS MAFK MLIP MLIP-IT1 LOC101927189 MLIP-AS1 KLHL31 GC06P053984 PIR57668
GH06H053825 1.3 Ensembl ENCODE dbSUPER 11.2 -170.9 -170868 5 ELF3 PKNOX1 TFAP4 SAP130 ARNT FEZF1 ZNF644 BCL11B TEAD3 ZNF664 LOC101927189 MLIP-IT1 MLIP LRRC1 KLHL31 PIR32511
GH06H053791 1.6 FANTOM5 ENCODE dbSUPER 8.5 -204.0 -204022 5 FOXA2 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9 SP3 SP5 ZHX2 LRRC1 KLHL31 MLIP-IT1 ENSG00000227885 PIR32511
GH06H054019 0.6 ENCODE 18.6 +21.5 21506 1 FOXA2 PRDM6 ZSCAN5C FEZF1 HNF4A YY1 TRIM28 MLIP-IT1 ERHP2 MLIP-AS1
GH06H053733 1.1 Ensembl ENCODE 9.7 -264.0 -264028 2 TBP RAD21 ZNF366 SCRT2 FOS RUNX3 ELK4 ZNF654 ZNF362 CEBPB KLHL31 MLIP-IT1 LRRC1 ENSG00000227885
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MLIP-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MLIP-IT1 Gene

53,998,890 bp from pter
54,007,152 bp from pter
8,263 bases
Plus strand

Genomic View for MLIP-IT1 Gene

Genes around MLIP-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MLIP-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MLIP-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MLIP-IT1 Gene

Proteins for MLIP-IT1 Gene

Post-translational modifications for MLIP-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MLIP-IT1 Gene

Domains & Families for MLIP-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MLIP-IT1 Gene

Function for MLIP-IT1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for MLIP-IT1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MLIP-IT1 Gene

Localization for MLIP-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MLIP-IT1 Gene

Pathways & Interactions for MLIP-IT1 Gene

SuperPathways for MLIP-IT1 Gene

No Data Available

Interacting Proteins for MLIP-IT1 Gene

Gene Ontology (GO) - Biological Process for MLIP-IT1 Gene


No data available for Pathways by source and SIGNOR curated interactions for MLIP-IT1 Gene

Drugs & Compounds for MLIP-IT1 Gene

No Compound Related Data Available

Transcripts for MLIP-IT1 Gene

mRNA/cDNA for MLIP-IT1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MLIP-IT1 Gene

MLIP intronic transcript 1 (non-protein coding):
Representative Sequences:

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for MLIP-IT1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MLIP-IT1 Gene

No ASD Table

Relevant External Links for MLIP-IT1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MLIP-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MLIP-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for MLIP-IT1 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x11.8), Skin - Sun Exposed (Lower leg) (x11.5), and Esophagus - Mucosa (x4.6).

SOURCE GeneReport for Unigene cluster for MLIP-IT1 Gene:

genes like me logo Genes that share expression patterns with MLIP-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MLIP-IT1 Gene

Orthologs for MLIP-IT1 Gene

Evolution for MLIP-IT1 Gene

Gene Tree for MLIP-IT1 (if available)
Gene Tree for MLIP-IT1 (if available)

No data available for Orthologs for MLIP-IT1 Gene

Paralogs for MLIP-IT1 Gene

No data available for Paralogs for MLIP-IT1 Gene

Variants for MLIP-IT1 Gene

Sequence variations from dbSNP and Humsavar for MLIP-IT1 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1000091692 -- 54,001,289(+) ACTAT(C/T)AGTGT intron-variant
rs1000401003 -- 54,002,067(+) ATAGT(G/T)ACTCT intron-variant
rs1000577823 -- 54,007,277(+) GGCTT(A/G)TAATA downstream-variant-500B
rs1000989619 -- 54,006,619(+) ACTAA(C/T)TGGTG intron-variant
rs1001625970 -- 54,001,694(+) TGGGT(C/T)CCAGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MLIP-IT1 Gene

Variant ID Type Subtype PubMed ID
dgv3316n106 CNV deletion 24896259
esv2759431 CNV gain+loss 17122850
esv2763552 CNV loss 21179565
esv3609039 CNV loss 21293372
nsv1018062 CNV gain 25217958
nsv1034955 CNV gain 25217958
nsv515808 CNV loss 19592680

Relevant External Links for MLIP-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MLIP-IT1 Gene

Disorders for MLIP-IT1 Gene

Relevant External Links for MLIP-IT1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MLIP-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MLIP-IT1 Gene

Publications for MLIP-IT1 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 60

Products for MLIP-IT1 Gene

Sources for MLIP-IT1 Gene

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