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Aliases & Descriptions for MLF1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Descriptions Myelodysplasia-myeloid leukemia factor 1 3 myeloid leukemia factor 1 2 myeloid leukemia factor 1 variant 1 2 myeloid leukemia factor 1 variant 2 2 myeloid leukemia factor 1 variant 3 2
Search outside databases for aliases for MLF1 genePrevious GC identifers: GC03P155550 GC03P159236 GC03P159570 GC03P159609
Summaries for MLF1 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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UniProtKB/Swiss-Prot: MLF1_HUMAN, P58340 Function : Involved in lineage commitment of primary hemopoietic progenitors by restrictingerythroid formation and enhancing myeloid formation. Interferes with erythopoietin-inducederythroid terminal differentiation by preventing cells from exiting the cell cycle throughsuppression of CDKN1B/p27Kip1 levels. Suppresses RFWD2/COP1 activity via CSN3 which activates p53and induces cell cycle arrest. Binds DNA and affects the expression of a number of genes so mayfunction as a transcription factor in the nucleus
Gene Wiki entry for MLF1
Genomic Location for MLF1
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the MLF1 gene Entrez Gene cytogenetic band: 3q25.1 Ensembl cytogenetic band: 3q25.32 HGNC cytogenetic band: 3q25 MLF1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 3 GeneLoc Exon Structure
GeneLoc location for GC03P159771:
(about GC identifiers )
Start:
159,771,677 bp from pter
End:
159,805,877 bp from pter
Size:
34,201 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000003.10 NT_005612.15 Proteins for MLF1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: MLF1_HUMAN, P58340 (See
protein sequence )Recommended Name: Myeloid leukemia factor 1 Size : 268 amino acids; 30627 Da
Subunit : Interacts with MLF1IP. Also interacts with NRBP1/MADM, YWHAZ/14-3-3-zeta and HNRPUL2/MANP.NRBP1 recruits a serine kinase which phosphorylates both itself and MLF1. Phosphorylated MLF1 thenbinds to YWHAZ and is retained in the cytoplasm. Retained in the nucleus by binding to HNRPUL2.Binds to COPS3/CSN3 which is required for suppression of RFWD2 and activation of p53
Subcellular location : Cytoplasm. Nucleus. Note=In non-hematopoietic cells, resides primarily in thecytoplasm with some punctate nuclear localization. Shuttles between the cytoplasm and nucleus. Inhematopoietic cells, located preferentially in the nucleus. Found in the nucleolus when fused toNPM
Post-translational modifications:
Phosphorylation is required for binding to YWHAZ (By similarity)1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (3 alternative transcripts):
NP_001123628.1 NP_001123629.1 NP_071888.1 ENSEMBL proteins: ENSP00000348157 ENSP00000327144 ENSP00000376568 ENSP00000376567 ENSP00000352025 ENSP00000376566 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: MLF1 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for MLF1: Assays for MLF1:
Protein
Domains/ Families for MLF1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P58340 ProtoNet protein and cluster: P58340
UniProtKB/Swiss-Prot: MLF1_HUMAN, P58340 Similarity : Belongs to the MLF family
Gene Function for MLF1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
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RNAi Products ,
Clones , and
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Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_022443 Applied Biosystems Silencer ® siRNAs for MLF1 Sigma-Aldrich siRNA and siRNA Panels for MLF1 Sigma-Aldrich shRNA for MLF1 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001130156                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001130156                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001130156  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_022443 UniProtKB/Swiss-Prot: MLF1_HUMAN, P58340 Function : Involved in lineage commitment of primary hemopoietic progenitors by restrictingerythroid formation and enhancing myeloid formation. Interferes with erythopoietin-inducederythroid terminal differentiation by preventing cells from exiting the cell cycle throughsuppression of CDKN1B/p27Kip1 levels. Suppresses RFWD2/COP1 activity via CSN3 which activates p53and induces cell cycle arrest. Binds DNA and affects the expression of a number of genes so mayfunction as a transcription factor in the nucleus
Genatlas biochemistry entry for MLF1 :myelodysplasia/myeloid leukemia factor 1.31kDa,fused with NPM1 in myelodysplastic syndrome withtranslocation t(3;5)(q25.1;q34),cytoplasmic protein expressed in a variety of tissues,homolog tomurine hemopoietic lineage switch HLS7 2 Gene Ontology (GO) molecular function terms (links to tree view) :
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Pathways & Interactions for MLF1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Gene Network CentralTM Interacting Genes and Proteins Network for MLF1 5/6 Interacting proteins for MLF1 (P58340 2 ENSP00000327144 3 ) via UniProtKB, MINT, and/or STRING (see all 6
)About this table 5/6 Gene Ontology (GO) biological process terms (links to tree view) (see all 6
):
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Drugs & Compounds for MLF1 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for MLF1
Transcripts for MLF1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
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ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_022443 Sigma-Aldrich siRNA and siRNA Panels for MLF1 Sigma-Aldrich shRNA for MLF1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001130156 NM_001130157 NM_022443
REFSEQ mRNAs for MLF1 gene (3 alternative transcripts): NM_001130156.1 NM_001130157.1 NM_022443.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001130156 NM_001130157 NM_022443
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001130156                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001130156                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001130156  
Additional cDNA sequence: AK056948.1 AK096889.1 AK297488.1 AK315402.1 AY848700.1 AY848701.1 AY848702.1 BC007045.1 BC095437.1 BX641078.1 BX647666.1 L49054.1
10 DOTS entries : DT.455878 DT.91768024 DT.91768025 DT.75102922 DT.99940054 DT.86853276 DT.91768026 DT.100789206 DT.100789207 DT.40117533
24/203 AceView cDNA sequences (see all 203
):BG055075 W56334 BM823975 AW573287 AI686260 BU674539 BG546401 BC007045 AA625682 AW131588 BX647666 AL120066 AK056948 AI332753 CA418910 AA843166 AI220091 NM_022443 T19178 AI766972 BI520174 AA974317 AI565360 AI140690
highest scoring ESTs for MLF1 :AA026647 AA164313 AA164314 AA400562 AA405119 AA463811 AA470924 AI307439 AI744010 AI911434
Unigene Cluster for MLF1: Myeloid leukemia factor 1 Hs.85195 [show with all ESTs ] Unigene Representative Sequence: BX641078 GeneLoc Exon Structure 5/11 Alternative Splicing Database (ASD) splice patterns (SP) for MLF1 (see all 11
) ExUns: 1a · 1b · 1c · 1d · 1e · 1f ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7a · 7b ^ 8a · 8b ^ 9a · 9b ^ 10a · 10b SP1 :             -                             SP2 :               -   -                         SP3 :           -   -   -   -     -                     SP4 :             -   -   -     -                     SP5 :           -   -   -   -                        
About this scheme ECgene alternative splicing isoforms for MLF1 6 Ensembl transcripts including schematic representations : ENST00000355893
ENST00000312827
ENST00000392822
ENST00000392821
ENST00000359117
ENST00000392820
Expression for MLF1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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MLF1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for MLF1 1 / 2 / 3
6 probe-sets matching MLF1 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: AAGGTCCTAGSOURCE GeneReport for Unigene cluster: Hs.85195 Expression variation in blood from EXPOLDB for MLF1
UniProtKB/Swiss-Prot: MLF1_HUMAN, P58340 Tissue specificity : Most abundant in testis, ovary, skeletal muscle, heart, kidney and colon. Lowexpression in spleen, thymus and peripheral blood leukocytes
Orthologs for MLF1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for MLF1 gene from 5/8 species (see all 8
)
About this table Species with no ortholog for MLF1 ENSEMBL Gene Tree for MLF1 Paralogs for MLF1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for MLF1 gene MLF2 2
SNPs/Variants for MLF1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for MLF1 (up to first 250kb)
Disorders & Mutations for MLF1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 601402 disorders : 601626 UniProtKB/Swiss-Prot: MLF1_HUMAN, P58340
A chromosomal aberration involving MLF1 is a cause of myelodysplastic syndrome (MDS).Translocation t(3;5)(q25.1;q34) with NPM1/NPM
8 Novoseek disease relationships for MLF1 gene
About this table Human Genome Epidemiology Navigator: MLF1 (2 documents)
Medical News for MLF1 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for MLF1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/31 PubMed articles for MLF1 gene (see all 31
): The t(3;5)(q25.1;q34) of myelodysplastic syndrome and acute myeloid leukemia produces a novel fusion gene, NPM-MLF1. (PubMed id 8570204) 1, 2, 3, 4 Yoneda-Kato N.... Morris S.W. (1996) Myeloid leukemia factor 1 regulates p53 by suppressing COP1 via COP9 signalosome subunit 3. (PubMed id 15861129) 1, 3, 4 Yoneda-Kato N.... Kato J.-Y. (2005) cDNA cloning and characterization of a novel gene encoding the MLF1- interacting protein MLF1IP. (PubMed id 15116101) 3, 4 Hanissian S.H.... Morris S.W. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Detection of NPM/MLF1 fusion in t(3;5)-positive acute myeloid leukemia and myelodysplasia. (PubMed id 14506644) 1, 3 Arber D.A....Slovak M.L. (2003) Gene variants associated with ischemic stroke: the cardiovascular health study. (PubMed id 19023099) 3 Luke M.M....Psaty B.M. (2009) Association of gene variants with incident myocardial infarction in the Cardiovascular Health Study. (PubMed id 17975119) 3 Shiffman D....Psaty B.M. (2008) Shuttling imbalance of MLF1 results in p53 instability and increases susceptibility to oncogenic transformation. (PubMed id 17967869) 3 Yoneda-Kato N. and Kato J.Y. (2008) Non-pathogenic protein aggregates in skeletal muscle in MLF1 transgenic mice. (PubMed id 17854834) 3 Li Z.F....Shelton G.D. (2008) A human protein-protein interaction network: a resource for annotating the proteome. (PubMed id 16169070) 3 Stelzl U....Wanker E.E. (2005)
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Genome Databases showing MLF1
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Ensembl ,
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Specialized Databases showing MLF1 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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