MKX Gene
protein-coding GIFtS : 49
GCID: GC10 M028003
mohawk homeobox (Previous names: chromosome 10 open reading frame 48, iroquois homeobox... ) (Previous symbols: C10orf48, IRXL1 )
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Aliasesfor MKX gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Mohawk Homeobox 1 2 MGC396161 IRXL11 2 3 5 Chromosome 10 Open Reading Frame 481 C10orf481 2 3 Homeobox Protein Mohawk2 Iroquois Homeobox Protein-Like 11 2 Iroquois Family Related Homeodomain Protein2 IFRX2 5
Export aliases for MKX gene to outside databases Previous GC identifer: GC10M027682
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Summariesfor MKX gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for MKX : The protein encoded by this gene is an IRX family-related homeobox protein that may play a role in cell adhesion. Studies in mice suggest that this protein may be a regulator of tendon development. Two transcript variants encoding the same protein have been found for this gene.(provided by RefSeq, Jun 2011) UniProtKB/Swiss-Prot: MKX_HUMAN, Q8IYA7 Function : May act as a morphogenetic regulator of cell adhesion (By similarity)Gene Wiki entry for MKX
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Genomic Viewsfor MKX gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000010.10 NC_018921.1 NT_008705.16 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the MKX gene promoter: Elk-1 Pax-5 POU3F1 STAT5A IRF-1 Cdc5 AP-2beta Cart-1 AP-2alpha AP-2alphaA Other transcription factors Search SABiosciences Chromatin IP Primers for MKX Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MKX
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 10p12.1 Ensembl cytogenetic band: 10p12.1 HGNC cytogenetic band: 10p12.1 MKX Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 10 GeneLoc Exon Structure
GeneLoc location for GC10M028003: view genomic region
(about GC identifiers )
Start:
27,961,803 bp from pter
End:
28,034,989 bp from pter
Size:
73,187 bases
Orientation:
minus strand
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Proteinsfor MKX gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: MKX_HUMAN, Q8IYA7 (See
protein sequence )Recommended Name: Homeobox protein Mohawk Size : 352 amino acids; 39331 Da
Subcellular location : Nucleus (Probable)
Secondary accessions : B3KWM5Explore the universe of human proteins at neXtProt for MKX: NX_Q8IYA7 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q8IYA7 MKX Protein expression data from MOPED and PaxDb : About this image REFSEQ proteins (2 alternative transcripts):
NP_001229631.1 NP_775847.2 ENSEMBL proteins: ENSP00000364946 ENSP00000452751 ENSP00000453746 ENSP00000400896 Human Recombinant Protein Products for MKX: Gene Ontology (GO): 1 cellular component term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005634 nucleus
IEA --
MKX for ontologies About GeneDecksing MKX Antibody Products: Assay Products for MKX:
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Protein
Domains / Familiesfor MKX gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
MKX for domains About GeneDecksing 4 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry Q8IYA7 ProtoNet protein and cluster: Q8IYA7
UniProtKB/Swiss-Prot: MKX_HUMAN, Q8IYA7 Similarity : Belongs to the TALE/IRO homeobox familySimilarity : Contains 1 homeobox DNA-binding domain
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Functionfor MKX gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory ,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase ,
shRNA from
OriGene ,
Sirion Biotech ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Sirion Biotech ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
Sirion Biotech ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Molecular Function: UniProtKB/Swiss-Prot Summary: MKX_HUMAN, Q8IYA7 Function : May act as a morphogenetic regulator of cell adhesion (By similarity)
Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0000981 sequence-specific DNA binding RNA polymerase II transcription factor activity
IEA -- GO:0001085 RNA polymerase II transcription factor binding
IEA -- GO:0003700 sequence-specific DNA binding transcription factor activity
-- -- GO:0005515 protein binding
-- -- GO:0043565 sequence-specific DNA binding
IEA --
MKX for ontologies About GeneDecksing Phenotypes: 1 GenomeRNAi human phenotype for MKX : 4 MGI mutant phenotypes (inferred from 5 alleles ) (MGI details for Mkx) :
MKX for phenotypes About GeneDecksing Animal Models: Mouse knock-outs for MKX: Mkx tm1Miu Mkx tm1.2Jian Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MKX (see all 2 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MKXOriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: MKX (NM_173576 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MKX Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MKX
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MKX
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Pathways & Interactionsfor MKX gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for MKX STRING Interaction
Network Preview (showing 5 interactants - click image to see 6)5/6 Interacting proteins for MKX (Q8IYA7 3 ENSP00000364946 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 6 )About this table Gene Ontology (GO): 5/11 biological process terms (GO ID links to tree view) (see all 11 ): About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0000122 negative regulation of transcription from RNA polymerase II promoter
IEA -- GO:0002932 tendon sheath development
IEA -- GO:0006366 transcription from RNA polymerase II promoter
-- -- GO:0007517 muscle organ development
ISS 16408284 GO:0010468 regulation of gene expression
-- --
MKX for ontologies About GeneDecksing
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Drugs & Compoundsfor MKX gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for MKX Search CenterWatch for drugs/clinical trials and news about MKX
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Transcriptsfor MKX gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
Sirion Biotech ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for MKX gene (2 alternative transcripts): NM_001242702.1 NM_173576.2 Unigene Cluster for MKX:
Mohawk homeobox Hs.128193 [show with all ESTs ] Unigene Representative Sequence: NM_173576 4 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000375790 (uc001itx.4 ) ENST00000460919 ENST00000561227 ENST00000419761 (uc001ity.4 )Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MKX (see all 2 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MKXOriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: MKX (NM_173576 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for MKX Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MKX
Additional cDNA sequence: AK125339.1 BC036207.1
2 DOTS entries : DT.97774780 DT.40127308
24/39 AceView cDNA sequences (see all 39 ):
F01353 Z41276 BF108805 AK125339 AI075375 AI910541 BQ937643 BI547447 AW298102 AI339844 NM_173576 BQ961518 BC036207 AI805198 BM542857 BF940586 CB121713 BM474155 AI910533 BI491189 BI769578 BF058244 Z41858 BU676453 GeneLoc Exon Structure 3 Alternative Splicing Database (ASD) splice patterns (SP) for MKX About this scheme ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 SP1 :               -     SP2 :               -     SP3 :                  
ECgene alternative splicing isoforms for MKX
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Expression for MKX gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section MKX expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: -- About this image MKX expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table
See MKX Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for MKX SOURCE GeneReport for Unigene cluster: Hs.128193 SABiosciences Expression via Pathway-Focused PCR Array including MKX : Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MKXBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat MKX QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MKX QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MKX In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MKX
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Orthologsfor MKX gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for MKX gene from 5/18 species (see all 18 ) About this table
ENSEMBL Gene Tree for MKX (if available)TreeFam Gene Tree for MKX (if available)
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Paralogsfor MKX gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for MKX gene IRX1 2 IRX3 2 IRX5 2 IRX2 2 IRX6 2 IRX4 2 2 SIMAP similar genes for MKX using alignment to 3 protein entries: MKX_HUMAN (see all proteins ):TGIF1 PKNOX1
MKX for paralogs About GeneDecksing
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Genomic Variantsfor MKX gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 10 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for MKX (27961803 - 28034989 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 2 variations for MKX 2 Indels : 41704 60997
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MKX
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Disorders
/ Diseasesfor MKX gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
MKX for disorders About GeneDecksing
OMIM gene information: 601332
OMIM disorders : --1 disease for MKX : About MalaCards smallpox Human Genome Epidemiology (HuGE) Navigator: MKX (1 document)Export disorders for MKX gene to outside databases
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Publicationsfor MKX gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for MKX gene, integrated from 9 sources (see all 16 ): (articles sorted by number of sources associating them with MKX) Utopia : connect your pdf to the dynamic world of online information
Mohawk is a novel homeobox gene expressed in the developing mouse embryo. (PubMed id 16408284) 1 , 3 Anderson D.M....Rawls A. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) In silico characterization of an Iroquois family-related homeodomain protein. (PubMed id 16077953) 1 , 9 Weinmann A....Teufel A. (2005) Genome-wide association study of antibody response to smallpox vaccine. (PubMed id 22542470) 1 Ovsyannikova I.G....Poland G.A. (2012) The atypical homeodomain transcription factor Mohawk controls tendon morphogenesis. (PubMed id 20696843) 1 Liu W....Jiang R. (2010) Maternal genes and facial clefts in offspring: a comp rehensive search for genetic associations in two population-based cleft studies from Scandinavia. (PubMed id 20634891) 1 Jugessur A....Murray J.C. (2010) The Mohawk homeobox gene is a critical regulator of t endon differentiation. (PubMed id 20498044) 1 Ito Y....Asahara H. (2010) Ubiquitin-mediated proteolysis of HuR by heat shock. (PubMed id 19322201) 1 Abdelmohsen K....Gorospe M. (2009) The homeobox gene Mohawk represses transcription by recruiting the sin3A/HDAC co-repressor complex. (PubMed id 19235719) 1 Anderson D.M....Rawls A. (2009) Toward a confocal subcellular atlas of the human proteome. (PubMed id 18029348) 1 Barbe L....Andersson-Svahn H. (2008)
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External Searches for MKX gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing MKX gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing MKX gene
(According to HUGE )
About This Section --
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Specialized Databases showing MKX gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for MKX Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for MKX gene: Search GeneIP for patents involving MKX GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor MKX gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 and Sirion Biotech , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript , LifeMap BioReagents , and Sirion Biotech , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences , In Situ Hybridization Assays from Advanced Cell Diagnostics , Animal models from inGenious Targeting Laboratory )About This Section
Browse OriGene Antibodies OriGene shRNA RFP for MKX OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for MKX OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for MKX OriGene Protein Over-expression Lysate for MKX Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for MKX OriGene 3'-UTR Clone for MKX OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for MKX OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for MKX Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for MKX OriGene Custom Protein Services for MKX OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat MKX QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing MKX QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat MKX QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat MKX QIAGEN QuantiFast Probe-based Assays in human , mouse , rat MKX QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat MKX
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MKX Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MKX
Search ThermoFisher Antibodies for MKX
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat MKX
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Aliases for MKX
Databases for MKX
Disorders / Diseases for MKX
Domains / Families for MKX
Drugs / Compounds for MKX
Expression for MKX
Function for MKX
Genomic Views for MKX
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Orthologs for MKX
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