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Aliases for MKRN7P Gene

Subcategory (RNA class) for MKRN7P Gene

lncRNA

Aliases for MKRN7P Gene

  • Makorin Ring Finger Protein 7, Pseudogene 2 3
  • Makorin Ring Finger Protein Pseudogene 3 2 3
  • Makorin Ring Finger Protein 1 Pseudogene 3
  • Zinc Finger Protein 127-Like 5 3
  • DJ981L23.2 3
  • ZNF127L5 3
  • MKRNP3 3

External Ids for MKRN7P Gene

ORGUL Members for MKRN7P Gene

Previous HGNC Symbols for MKRN7P Gene

  • ZNF127L5
  • MKRNP3

Previous GeneCards Identifiers for MKRN7P Gene

  • GC20M045093

Summaries for MKRN7P Gene

GeneCards Summary for MKRN7P Gene

MKRN7P (Makorin Ring Finger Protein 7, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MKRN7P Gene

Genomics for MKRN7P Gene

Genomic Location for MKRN7P Gene

Chromosome:
20
Start:
46,463,660 bp from pter
End:
46,465,292 bp from pter
Size:
1,633 bases
Orientation:
Minus strand

Genomic View for MKRN7P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for MKRN7P Gene

No data available for Regulatory Elements for MKRN7P Gene

Proteins for MKRN7P Gene

Post-translational modifications for MKRN7P Gene

No Post-translational modifications

No data available for DME Specific Peptides for MKRN7P Gene

Domains & Families for MKRN7P Gene

Gene Families for MKRN7P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MKRN7P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MKRN7P Gene

Function for MKRN7P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MKRN7P Gene

Localization for MKRN7P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MKRN7P Gene

Pathways & Interactions for MKRN7P Gene

SuperPathways for MKRN7P Gene

No Data Available

Interacting Proteins for MKRN7P Gene

Gene Ontology (GO) - Biological Process for MKRN7P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MKRN7P Gene

Drugs & Compounds for MKRN7P Gene

No Compound Related Data Available

Transcripts for MKRN7P Gene

mRNA/cDNA for MKRN7P Gene

(1) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MKRN7P Gene

Makorin ring finger protein 7, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MKRN7P Gene

No ASD Table

Relevant External Links for MKRN7P Gene

GeneLoc Exon Structure for
MKRN7P
ECgene alternative splicing isoforms for
MKRN7P

Expression for MKRN7P Gene

mRNA expression in normal human tissues for MKRN7P Gene

mRNA differential expression in normal tissues according to GTEx for MKRN7P Gene

This gene is overexpressed in Brain - Cerebellum (x4.9) and Brain - Cerebellar Hemisphere (x4.3).

SOURCE GeneReport for Unigene cluster for MKRN7P Gene Hs.717103

genes like me logo Genes that share expression patterns with MKRN7P: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MKRN7P Gene

Orthologs for MKRN7P Gene

Evolution for MKRN7P Gene

ENSEMBL:
Gene Tree for MKRN7P (if available)
TreeFam:
Gene Tree for MKRN7P (if available)

No data available for Orthologs for MKRN7P Gene

Paralogs for MKRN7P Gene

No data available for Paralogs for MKRN7P Gene

Variants for MKRN7P Gene

Sequence variations from dbSNP and Humsavar for MKRN7P Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs24236 -- 46,464,220(-) CAGGC(A/G)TGCAG nc-transcript-variant
rs279729 -- 46,464,486(+) CACAC(A/G)TCGTA nc-transcript-variant
rs279730 -- 46,463,878(+) TCACA(C/T)GCCAC nc-transcript-variant
rs454699 -- 46,463,161(+) AGAAT(C/T)GCTTG downstream-variant-500B
rs678086 -- 46,467,271(+) ACTTT(A/C)CACAC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MKRN7P Gene

Variant ID Type Subtype PubMed ID
nsv833994 CNV Gain 17160897

Relevant External Links for MKRN7P Gene

HapMap Linkage Disequilibrium report
MKRN7P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MKRN7P Gene

Disorders for MKRN7P Gene

Relevant External Links for MKRN7P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MKRN7P
genes like me logo Genes that share disorders with MKRN7P: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MKRN7P Gene

Publications for MKRN7P Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 67

Products for MKRN7P Gene

Sources for MKRN7P Gene

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