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Aliases for MKRN7P Gene

Subcategory (RNA class) for MKRN7P Gene

lncRNA

Aliases for MKRN7P Gene

  • Makorin Ring Finger Protein 7, Pseudogene 2 3
  • Makorin Ring Finger Protein Pseudogene 3 2 3
  • Makorin Ring Finger Protein 1 Pseudogene 3
  • Zinc Finger Protein 127-Like 5 3
  • DJ981L23.2 3
  • ZNF127L5 3
  • MKRNP3 3

External Ids for MKRN7P Gene

ORGUL Members for MKRN7P Gene

Previous Symbols for MKRN7P Gene

  • ZNF127L5
  • MKRNP3

Summaries for MKRN7P Gene

GeneCards Summary for MKRN7P Gene

MKRN7P (Makorin Ring Finger Protein 7, Pseudogene) is a Pseudogene, and belongs to the lncRNA class.

fRNAdb sequence ontologies for MKRN7P Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MKRN7P Gene

Genomics for MKRN7P Gene

Genomic Location for MKRN7P Gene

Start:
46,463,660 bp from pter
End:
46,465,292 bp from pter
Size:
1,633 bases
Orientation:
Minus strand

Genomic View for MKRN7P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MKRN7P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MKRN7P Gene

ORGUL Member Location for MKRN7P Gene

ORGUL Member Location for MKRN7P gene

No data available for Regulatory Elements for MKRN7P Gene

Proteins for MKRN7P Gene

Post-translational modifications for MKRN7P Gene

No Post-translational modifications

No data available for DME Specific Peptides for MKRN7P Gene

Domains for MKRN7P Gene

Gene Families for MKRN7P Gene

HGNC:
  • RNF :RING-type (C3HC4) zinc fingers

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MKRN7P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MKRN7P Gene

Function for MKRN7P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MKRN7P Gene

Localization for MKRN7P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MKRN7P Gene

Pathways for MKRN7P Gene

SuperPathways for MKRN7P Gene

No Data Available

Interacting Proteins for MKRN7P Gene

Gene Ontology (GO) - Biological Process for MKRN7P Gene

None

No data available for Pathways by source for MKRN7P Gene

Transcripts for MKRN7P Gene

mRNA/cDNA for MKRN7P Gene

(1) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MKRN7P Gene

Makorin ring finger protein 7, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MKRN7P Gene

No ASD Table

Relevant External Links for MKRN7P Gene

GeneLoc Exon Structure for
MKRN7P
ECgene alternative splicing isoforms for
MKRN7P

Expression for MKRN7P Gene

mRNA expression in normal human tissues for MKRN7P Gene

mRNA differential expression in normal tissues according to GTEx for MKRN7P Gene

This gene is overexpressed in Brain - Cerebellum (4.9) and Brain - Cerebellar Hemisphere (4.3).

SOURCE GeneReport for Unigene cluster for MKRN7P Gene Hs.717103

genes like me logo Genes that share expressions with MKRN7P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for MKRN7P Gene

Orthologs for MKRN7P Gene

Evolution for MKRN7P Gene

ENSEMBL:
Gene Tree for MKRN7P (if available)
TreeFam:
Gene Tree for MKRN7P (if available)

No data available for Orthologs for MKRN7P Gene

Paralogs for MKRN7P Gene

No data available for Paralogs for MKRN7P Gene

Variants for MKRN7P Gene

Sequence variations from dbSNP and Humsavar for MKRN7P Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs24236 -- 46,464,220(-) CAGGC(A/G)TGCAG nc-transcript-variant
rs279729 -- 46,464,486(+) CACAC(A/G)TCGTA nc-transcript-variant
rs279730 -- 46,463,878(+) TCACA(C/T)GCCAC nc-transcript-variant
rs454699 -- 46,463,161(+) AGAAT(C/T)GCTTG downstream-variant-500B
rs678086 -- 46,467,271(+) ACTTT(A/C)CACAC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MKRN7P Gene

Variant ID Type Subtype PubMed ID
nsv833994 CNV Gain 17160897

Relevant External Links for MKRN7P Gene

HapMap Linkage Disequilibrium report
MKRN7P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MKRN7P Gene

Disorders for MKRN7P Gene

No disorders were found for MKRN7P Gene.

No data available for UniProtKB/Swiss-Prot for MKRN7P Gene

Publications for MKRN7P Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3

Products for MKRN7P Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MKRN7P
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for MKRN7P
    • Block miRNA regulation of MKRN7P using miScript Target Protectors

    Sources for MKRN7P Gene

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