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Aliases for MKRN2OS Gene

Aliases for MKRN2OS Gene

  • MKRN2 Opposite Strand 2 3
  • MKRN2 Antisense Gene Protein 1 3 4
  • MKRN2 Antisense RNA 1 2 4
  • MKRN2-AS1 3 4
  • C3orf83 3 4
  • MKRN2 Antisense RNA 1 (Non-Protein Coding) 3
  • Chromosome 3 Open Reading Frame 83 2
  • MKRN2 Opposite Strand Protein 3

External Ids for MKRN2OS Gene

Previous HGNC Symbols for MKRN2OS Gene

  • MKRN2-AS1
  • C3orf83

Summaries for MKRN2OS Gene

GeneCards Summary for MKRN2OS Gene

MKRN2OS (MKRN2 Opposite Strand) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MKRN2OS Gene

Genomics for MKRN2OS Gene

Genomic Location for MKRN2OS Gene

Start:
12,514,934 bp from pter
End:
12,561,059 bp from pter
Size:
46,126 bases
Orientation:
Minus strand

Genomic View for MKRN2OS Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MKRN2OS Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MKRN2OS Gene

No data available for Regulatory Elements for MKRN2OS Gene

Proteins for MKRN2OS Gene

  • Protein details for MKRN2OS Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    H3BPM6-MKROS_HUMAN
    Recommended name:
    MKRN2 opposite strand protein
    Protein Accession:
    H3BPM6
    Secondary Accessions:

    Protein attributes for MKRN2OS Gene

    Size:
    223 amino acids
    Molecular mass:
    25451 Da
    Quaternary structure:
    No Data Available

neXtProt entry for MKRN2OS Gene

Proteomics data for MKRN2OS Gene at MOPED

Post-translational modifications for MKRN2OS Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for MKRN2OS Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for MKRN2OS Gene

Domains for MKRN2OS Gene

Protein Domains for MKRN2OS Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MKRN2OS: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MKRN2OS Gene

Function for MKRN2OS Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MKRN2OS Gene

Localization for MKRN2OS Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MKRN2OS Gene

Pathways for MKRN2OS Gene

SuperPathways for MKRN2OS Gene

No Data Available

Interacting Proteins for MKRN2OS Gene

Gene Ontology (GO) - Biological Process for MKRN2OS Gene

None

No data available for Pathways by source for MKRN2OS Gene

Transcripts for MKRN2OS Gene

mRNA/cDNA for MKRN2OS Gene

(5) REFSEQ mRNAs :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MKRN2OS

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MKRN2OS Gene

No ASD Table

Relevant External Links for MKRN2OS Gene

GeneLoc Exon Structure for
MKRN2OS
ECgene alternative splicing isoforms for
MKRN2OS

Expression for MKRN2OS Gene

mRNA expression in normal human tissues for MKRN2OS Gene

genes like me logo Genes that share expressions with MKRN2OS: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MKRN2OS Gene

Orthologs for MKRN2OS Gene

This gene was present in the common ancestor of animals.

Orthologs for MKRN2OS Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC100611216 35
  • 99.4 (n)
  • 99.1 (a)
cow
(Bos Taurus)
Mammalia C3orf83 36
  • 75 (a)
OneToOne
LOC782327 35
  • 77.94 (n)
  • 75.71 (a)
dog
(Canis familiaris)
Mammalia C3orf83 36
  • 80 (a)
OneToOne
LOC100688322 35
  • 83.26 (n)
  • 80.27 (a)
mouse
(Mus musculus)
Mammalia 2510049J12Rik 35
  • 75.77 (n)
  • 71.3 (a)
2510049J12Rik 16
2510049J12Rik 36
  • 71 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C3orf83 36
  • 61 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC100361147 35
  • 76.85 (n)
  • 72.22 (a)
chicken
(Gallus gallus)
Aves C3orf83 36
  • 50 (a)
OneToOne
LOC415966 35
  • 59.58 (n)
  • 51.21 (a)
lizard
(Anolis carolinensis)
Reptilia C3orf83 36
  • 58 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii C3orf83 (1 of 2) 36
  • 36 (a)
OneToMany
C3orf83 (2 of 2) 36
  • 53 (a)
OneToMany
LOC100150803 35
  • 60.25 (n)
  • 54.81 (a)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP007899 35
  • 46.8 (n)
  • 33.84 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG9967 35
  • 45.1 (n)
  • 31.86 (a)
CG9967 36
  • 21 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea W10D9.3 36
  • 20 (a)
OneToOne
Species with no ortholog for MKRN2OS:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for MKRN2OS Gene

ENSEMBL:
Gene Tree for MKRN2OS (if available)
TreeFam:
Gene Tree for MKRN2OS (if available)

Paralogs for MKRN2OS Gene

No data available for Paralogs for MKRN2OS Gene

Variants for MKRN2OS Gene

Sequence variations from dbSNP and Humsavar for MKRN2OS Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs959088 -- 12,540,639(+) gaagc(C/G)agggt intron-variant
rs1695230 -- 12,540,515(+) AACTG(A/C)AATCG intron-variant
rs1699344 -- 12,540,602(+) ggtgc(A/G)gtggc intron-variant
rs2442815 -- 12,541,126(+) ACAAA(C/T)ATGCT intron-variant
rs2442816 -- 12,551,705(+) ccaag(A/T)tgggc intron-variant

Relevant External Links for MKRN2OS Gene

HapMap Linkage Disequilibrium report
MKRN2OS

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for MKRN2OS Gene

Disorders for MKRN2OS Gene

No disorders were found for MKRN2OS Gene.

No data available for UniProtKB/Swiss-Prot for MKRN2OS Gene

Publications for MKRN2OS Gene

  1. The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 3 4

Products for MKRN2OS Gene

Sources for MKRN2OS Gene

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