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Aliases for MKNK1-AS1 Gene

Subcategory (RNA class) for MKNK1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MKNK1-AS1 Gene

  • MKNK1 Antisense RNA 1 2 3 5
  • MKNK1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for MKNK1-AS1 Gene

Previous GeneCards Identifiers for MKNK1-AS1 Gene

  • GC01P047006

Summaries for MKNK1-AS1 Gene

GeneCards Summary for MKNK1-AS1 Gene

MKNK1-AS1 (MKNK1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MKNK1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MKNK1-AS1 Gene

Genomics for MKNK1-AS1 Gene

GeneHancer (GH) Regulatory Elements for MKNK1-AS1 Gene

Promoters and enhancers for MKNK1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I046549 Enhancer 0.6 ENCODE 0.4 +11.1 11131 1.2 MXI1 RFX1 MAX BMI1 ZFHX2 GLIS2 EGR1 RFX3 POLR2A FOXP2 KNCN MKNK1 CMPK1 MKNK1-AS1
GH01I046556 Enhancer 0.6 Ensembl ENCODE 0.4 +18.3 18305 0.4 MITF BHLHE40 MAX KNCN MKNK1-AS1 GC01P046604
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MKNK1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MKNK1-AS1 Gene

Genomic Locations for MKNK1-AS1 Gene
chr1:46,538,696-46,570,255
(GRCh38/hg38)
Size:
31,560 bases
Orientation:
Plus strand
chr1:47,004,368-47,035,927
(GRCh37/hg19)

Genomic View for MKNK1-AS1 Gene

Genes around MKNK1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MKNK1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MKNK1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MKNK1-AS1 Gene

Proteins for MKNK1-AS1 Gene

Post-translational modifications for MKNK1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MKNK1-AS1 Gene

Domains & Families for MKNK1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MKNK1-AS1 Gene

Function for MKNK1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MKNK1-AS1 Gene

Localization for MKNK1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MKNK1-AS1 Gene

Pathways & Interactions for MKNK1-AS1 Gene

SuperPathways for MKNK1-AS1 Gene

No Data Available

Interacting Proteins for MKNK1-AS1 Gene

Gene Ontology (GO) - Biological Process for MKNK1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MKNK1-AS1 Gene

Drugs & Compounds for MKNK1-AS1 Gene

No Compound Related Data Available

Transcripts for MKNK1-AS1 Gene

mRNA/cDNA for MKNK1-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MKNK1-AS1 Gene

MKNK1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MKNK1-AS1 Gene

No ASD Table

Relevant External Links for MKNK1-AS1 Gene

GeneLoc Exon Structure for
MKNK1-AS1
ECgene alternative splicing isoforms for
MKNK1-AS1

Expression for MKNK1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MKNK1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MKNK1-AS1 Gene

This gene is overexpressed in Whole Blood (x10.8) and Pancreas (x4.6).

SOURCE GeneReport for Unigene cluster for MKNK1-AS1 Gene:

Hs.601863
genes like me logo Genes that share expression patterns with MKNK1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MKNK1-AS1 Gene

Orthologs for MKNK1-AS1 Gene

Evolution for MKNK1-AS1 Gene

ENSEMBL:
Gene Tree for MKNK1-AS1 (if available)
TreeFam:
Gene Tree for MKNK1-AS1 (if available)

No data available for Orthologs for MKNK1-AS1 Gene

Paralogs for MKNK1-AS1 Gene

No data available for Paralogs for MKNK1-AS1 Gene

Variants for MKNK1-AS1 Gene

Sequence variations from dbSNP and Humsavar for MKNK1-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000019545 -- 46,543,228(+) AT/ intron_variant
rs1000034743 -- 46,549,538(+) T/C intron_variant
rs1000070478 -- 46,545,080(+) G/A intron_variant
rs1000088476 -- 46,549,792(+) A/T intron_variant
rs1000096104 -- 46,539,610(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for MKNK1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2761743 CNV gain 21179565
nsv1008246 CNV loss 25217958
nsv1009193 CNV gain 25217958
nsv755 CNV insertion 18451855

Additional Variant Information for MKNK1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MKNK1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MKNK1-AS1 Gene

Disorders for MKNK1-AS1 Gene

Additional Disease Information for MKNK1-AS1

No disorders were found for MKNK1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MKNK1-AS1 Gene

Publications for MKNK1-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  2. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3

Products for MKNK1-AS1 Gene

Sources for MKNK1-AS1 Gene

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