Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIRLET7BHG Gene

Subcategory (RNA class) for MIRLET7BHG Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIRLET7BHG Gene

  • MIRLET7B Host Gene 2 3
  • MIRLET7B Host Gene (Non-Protein Coding) 2 3
  • Linc-Ppara 3

External Ids for MIRLET7BHG Gene

Previous GeneCards Identifiers for MIRLET7BHG Gene

  • GC00U927125
  • GC22P046482

Summaries for MIRLET7BHG Gene

GeneCards Summary for MIRLET7BHG Gene

MIRLET7BHG (MIRLET7B Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIRLET7BHG Gene

Genomics for MIRLET7BHG Gene

Genomic Location for MIRLET7BHG Gene

Start:
46,053,869 bp from pter
End:
46,113,928 bp from pter
Size:
60,060 bases
Orientation:
Plus strand

Genomic View for MIRLET7BHG Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIRLET7BHG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIRLET7BHG Gene

No data available for Regulatory Elements for MIRLET7BHG Gene

Proteins for MIRLET7BHG Gene

Post-translational modifications for MIRLET7BHG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIRLET7BHG Gene

Domains for MIRLET7BHG Gene

Gene Families for MIRLET7BHG Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIRLET7BHG: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIRLET7BHG Gene

Function for MIRLET7BHG Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIRLET7BHG Gene

Localization for MIRLET7BHG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIRLET7BHG Gene

Pathways for MIRLET7BHG Gene

SuperPathways for MIRLET7BHG Gene

No Data Available

Interacting Proteins for MIRLET7BHG Gene

Gene Ontology (GO) - Biological Process for MIRLET7BHG Gene

None

No data available for Pathways by source for MIRLET7BHG Gene

Transcripts for MIRLET7BHG Gene

mRNA/cDNA for MIRLET7BHG Gene

Unigene Clusters for MIRLET7BHG Gene

MIRLET7B host gene (non-protein coding):
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MIRLET7BHG
    • Block miRNA regulation of MIRLET7BHG using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for MIRLET7BHG

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for MIRLET7BHG Gene

    No ASD Table

    Relevant External Links for MIRLET7BHG Gene

    GeneLoc Exon Structure for
    MIRLET7BHG
    ECgene alternative splicing isoforms for
    MIRLET7BHG

    Expression for MIRLET7BHG Gene

    mRNA expression in normal human tissues for MIRLET7BHG Gene

    SOURCE GeneReport for Unigene cluster for MIRLET7BHG Gene Hs.235838

    genes like me logo Genes that share expressions with MIRLET7BHG: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for MIRLET7BHG Gene

    Orthologs for MIRLET7BHG Gene

    This gene was present in the common ancestor of human and chimp.

    Orthologs for MIRLET7BHG Gene

    Organism Taxonomy Gene Similarity Type Details
    chimpanzee
    (Pan troglodytes)
    Mammalia -- 36
    • 96 (a)
    OneToOne
    Species with no ortholog for MIRLET7BHG:
    • A. gosspyii yeast (Ashbya gossypii)
    • Actinobacteria (Mycobacterium tuberculosis)
    • African clawed frog (Xenopus laevis)
    • African malaria mosquito (Anopheles gambiae)
    • Alicante grape (Vitis vinifera)
    • alpha proteobacteria (Wolbachia pipientis)
    • amoeba (Dictyostelium discoideum)
    • Archea (Pyrococcus horikoshii)
    • baker's yeast (Saccharomyces cerevisiae)
    • barley (Hordeum vulgare)
    • beta proteobacteria (Neisseria meningitidis)
    • bread mold (Neurospora crassa)
    • chicken (Gallus gallus)
    • Chromalveolata (Phytophthora infestans)
    • common water flea (Daphnia pulex)
    • corn (Zea mays)
    • cow (Bos Taurus)
    • dog (Canis familiaris)
    • E. coli (Escherichia coli)
    • filamentous fungi (Aspergillus nidulans)
    • Firmicute bacteria (Streptococcus pneumoniae)
    • fission yeast (Schizosaccharomyces pombe)
    • fruit fly (Drosophila melanogaster)
    • green algae (Chlamydomonas reinhardtii)
    • honey bee (Apis mellifera)
    • K. lactis yeast (Kluyveromyces lactis)
    • lizard (Anolis carolinensis)
    • loblloly pine (Pinus taeda)
    • malaria parasite (Plasmodium falciparum)
    • medicago trunc (Medicago Truncatula)
    • moss (Physcomitrella patens)
    • mouse (Mus musculus)
    • oppossum (Monodelphis domestica)
    • orangutan (Pongo pygmaeus)
    • pig (Sus scrofa)
    • platypus (Ornithorhynchus anatinus)
    • rainbow trout (Oncorhynchus mykiss)
    • rat (Rattus norvegicus)
    • rice (Oryza sativa)
    • rice blast fungus (Magnaporthe grisea)
    • schistosome parasite (Schistosoma mansoni)
    • sea anemone (Nematostella vectensis)
    • sea squirt (Ciona intestinalis)
    • sea squirt (Ciona savignyi)
    • sea urchin (Strongylocentrotus purpuratus)
    • sorghum (Sorghum bicolor)
    • soybean (Glycine max)
    • stem rust fungus (Puccinia graminis)
    • sugarcane (Saccharum officinarum)
    • thale cress (Arabidopsis thaliana)
    • tomato (Lycopersicon esculentum)
    • toxoplasmosis (Toxoplasma gondii)
    • Trichoplax (Trichoplax adhaerens)
    • tropical clawed frog (Silurana tropicalis)
    • wheat (Triticum aestivum)
    • worm (Caenorhabditis elegans)
    • zebrafish (Danio rerio)

    Evolution for MIRLET7BHG Gene

    ENSEMBL:
    Gene Tree for MIRLET7BHG (if available)
    TreeFam:
    Gene Tree for MIRLET7BHG (if available)

    Paralogs for MIRLET7BHG Gene

    No data available for Paralogs for MIRLET7BHG Gene

    Variants for MIRLET7BHG Gene

    Sequence variations from dbSNP and Humsavar for MIRLET7BHG Gene

    SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
    rs742901 -- 46,099,414(+) TGCCC(C/T)GGGGC intron-variant
    rs742902 -- 46,099,181(+) GATGA(A/T)TCTTG intron-variant
    rs873492 -- 46,102,010(-) GCTTG(G/T)CCCAC intron-variant
    rs910359 -- 46,106,592(-) GGGTC(C/T)GTGCC intron-variant
    rs910360 -- 46,106,425(-) CCAAC(A/G)TTGTG intron-variant

    Structural Variations from Database of Genomic Variants (DGV) for MIRLET7BHG Gene

    Variant ID Type Subtype PubMed ID
    dgv5004n71 CNV Loss 21882294
    dgv5005n71 CNV Loss 21882294
    nsv829281 CNV Gain 20364138
    dgv5006n71 CNV Loss 21882294
    dgv776n67 CNV Gain 20364138
    dgv5008n71 CNV Loss 21882294
    nsv829285 CNV Gain 20364138
    nsv471212 CNV Loss 18288195
    dgv5009n71 CNV Loss 21882294
    dgv777n67 CNV Gain 20364138
    dgv5010n71 CNV Loss 21882294
    nsv915336 CNV Loss 21882294
    nsv471213 CNV Gain 18288195
    nsv459904 CNV Loss 19166990
    nsv915337 CNV Loss 21882294
    dgv5011n71 CNV Loss 21882294
    nsv516279 CNV Loss 19592680
    nsv915340 CNV Loss 21882294
    dgv5012n71 CNV Loss 21882294
    esv25384 CNV Gain 19812545
    esv2661950 CNV Deletion 23128226
    esv1346561 CNV Insertion 17803354
    esv2724423 CNV Deletion 23290073
    esv1011338 CNV Deletion 20482838
    nsv915344 CNV Loss 21882294
    nsv459905 CNV Loss 19166990
    esv271386 CNV Insertion 20981092
    nsv834224 CNV Loss 17160897

    Relevant External Links for MIRLET7BHG Gene

    HapMap Linkage Disequilibrium report
    MIRLET7BHG

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MIRLET7BHG Gene

    Disorders for MIRLET7BHG Gene

    No disorders were found for MIRLET7BHG Gene.

    No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for MIRLET7BHG Gene

    Publications for MIRLET7BHG Gene

    1. Cytoplasmic sequestration of HDAC7 from mitochondrial and nuclear compartments upon initiation of apoptosis. (PMID: 15364908) Bakin R.E. … Jung M.O. (J. Biol. Chem. 2004) 2 3
    2. Multiple knockout mouse models reveal lincRNAs are required for life and brain development. (PMID: 24381249) Sauvageau M. … Rinn J.L. (Elife 2013) 2 3
    3. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3
    4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

    Products for MIRLET7BHG Gene

    Sources for MIRLET7BHG Gene

    Back to Top

    Content