MIRLET7BHG Gene
RNA gene GIFtS: 30
GCID: GC22P046482
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MIRLET7B host gene (non-protein coding)
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Aliases
for MIRLET7BHG gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
Subcategory (RNA class): miRNA
Quality score for this RNA gene is 3
| Aliases |
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| MIRLET7B Host Gene (Non-Protein Coding)1 2 | | RP4-695O20__B.102 | | FLJ273654 | | CDNA FLJ27365 Fis, Clone UBA026334 | | Novel Transcript4 | | Uncharacterized Protein4 |
Export aliases for MIRLET7BHG gene to outside databasesPrevious GC identifer: GC00U927125 |
Summaries
for MIRLET7BHG gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
-- |
Genomic Views
for MIRLET7BHG gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000022.10 NC_018933.1 NT_011520.12
Regulatory elements:
 Search SABiosciences Regulatory transcription factor binding sites for MIRLET7BHG
Other transcription factors
Search SABiosciences Chromatin IP Primers for MIRLET7BHG
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat MIRLET7BHG |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 22q13.31 Ensembl cytogenetic band: 22q13.31 HGNC cytogenetic band: 22q13.31MIRLET7BHG Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 22 GeneLoc Exon Structure GeneLoc location for GC22P046482: view genomic region
(about GC identifiers)
Start:
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46,449,749 bp from pter |
End:
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46,509,808 bp from pter |
Size:
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60,060 bases |
Orientation:
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plus strand |
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Proteins
for MIRLET7BHG gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/TrEMBL: Q6ZNQ0 (See
protein sequence)Recommended Name: Novel transcript Size: 160 amino acids; 17405 DaUniProtKB/TrEMBL: B1AKH7 (See
protein sequence) Recommended Name: FLJ27365 protein, isoform CRA_a Size: 219 amino acids; 23653 DaUniProtKB/TrEMBL: G3XAK8 (See
protein sequence) Recommended Name: FLJ27365 protein, isoform CRA_b Size: 74 amino acids; 8376 DaUniProtKB/TrEMBL: B1AKH8 (See
protein sequence) Recommended Name: Novel transcript Size: 49 amino acids; 5413 DaPost-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_B1AKH8
MIRLET7BHG Protein expression data from MOPED and PaxDb: About this image 
ENSEMBL proteins: ENSP00000370439 ENSP00000410936 ENSP00000416704 ENSP00000353966
Human Recombinant Protein Products for MIRLET7BHG:
MIRLET7BHG Antibody Products:
Assay Products for MIRLET7BHG: |
Protein
Domains /
Families
for MIRLET7BHG gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| ProtoNet protein and cluster: Q6ZNQ0 |
Function
for MIRLET7BHG gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase,
shRNA from
OriGene,
Sirion Biotech,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Sirion Biotech,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
Sirion Biotech,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
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Animal Models:
In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MIRLET7BHG |
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Pathways & Interactions
for MIRLET7BHG gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
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Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for MIRLET7BHG
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Drugs & Compounds
for MIRLET7BHG gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for MIRLET7BHG
Search CenterWatch for drugs/clinical trials and news about MIRLET7BHG 
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Transcripts
for MIRLET7BHG gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
Sirion Biotech,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
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REFSEQ mRNAs for MIRLET7BHG gene: NM_207477.1 Unigene Cluster for MIRLET7BHG: MIRLET7B host gene (non-protein coding) Hs.235838 [show with all ESTs]Unigene Representative Sequence: AK1271174 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000381051(uc003bgr.4) ENST00000443490 ENST00000435439 ENST00000360737(uc003bgu.2 uc003bgt.4)
Primer
Products: |  | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for MIRLET7BHG
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse / rat MIRLET7BHG | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat MIRLET7BHG | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat MIRLET7BHG |
Additional cDNA sequence: AK023424.1 AK127117.1 AK130875.1 NR_027033.1 5 DOTS entries: DT.100726993 DT.97775268 DT.425944 DT.95257067 DT.40236411 24/41 AceView cDNA sequences (see all 41): BF933010 BM701741 BF436480 CK820910 H55320 AA603041 BQ890633 AK130875 NM_207477 BQ895974 BF344234 F15682 AA775983 AK023424 BQ711270 F18236 BM666595 AA758934 BE876698 AI457175 AJ572271 AI300535 BC036832 BF003052
GeneLoc Exon Structure
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Expression
for MIRLET7BHG gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| Expression evidence for MIRLET7BHG:none
MIRLET7BHG expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: GCAAAATCCC
About this image
See MIRLET7BHG Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for MIRLET7BHG
SOURCE GeneReport for Unigene cluster: Hs.235838
SABiosciences Custom PCR Arrays for MIRLET7BHG
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for MIRLET7BHG
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse / rat MIRLET7BHG | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat MIRLET7BHG | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat MIRLET7BHG | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MIRLET7BHG |
Orthologs
for MIRLET7BHG gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
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ENSEMBL Gene Tree for MIRLET7BHG (if available)
TreeFam Gene Tree for MIRLET7BHG (if available) |
Paralogs
for MIRLET7BHG gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
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Genomic Variants
for MIRLET7BHG gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
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| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 22 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
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HapMap Linkage Disequilibrium report for MIRLET7BHG (46449749 - 46509808 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV) variations for MIRLET7BHG: -- | SABiosciences Cancer Mutation PCR Assays |
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Disorders
/ Diseases
for MIRLET7BHG gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
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Publications
for MIRLET7BHG gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
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PubMed articles for MIRLET7BHG gene integrated from 9 sources:
(articles sorted by number of sources associating them with MIRLET7BHG) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Cytoplasmic sequestration of HDAC7 from mitochondrial and nuclear compartments upon initiation of apoptosis. (PubMed id 15364908)1, 3 Bakin R.E. and Jung M.O. (2004)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1 Ota T.... Sugano S. (2004)
- Normalization and subtraction: two approaches to facilitate gene discovery. (PubMed id 8889548)1 Bonaldo M.F.... Soares M.B. (1996)
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External Searches for MIRLET7BHG gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
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Genome Databases showing MIRLET7BHG gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
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Other Databases showing MIRLET7BHG gene
(According to HUGE)
About This Section
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Specialized Databases showing MIRLET7BHG gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for MIRLET7BHG | Pharmacogenomics, SNPs, Pathways |
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About This Section
| Patent Information for MIRLET7BHG gene:
Search GeneIP for patents involving MIRLET7BHG
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for MIRLET7BHG gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
About This Section
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|  | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat MIRLET7BHG | | | Search QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing MIRLET7BHG | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat MIRLET7BHG | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat MIRLET7BHG | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat MIRLET7BHG | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat MIRLET7BHG |
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 | | | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for MIRLET7BHG |
|  |  |  |  | | | | | Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat MIRLET7BHG |
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