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Aliases for MIRLET7BHG Gene

Subcategory (RNA class) for MIRLET7BHG Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIRLET7BHG Gene

  • MIRLET7B Host Gene 2 3 5
  • MIRLET7B Host Gene (Non-Protein Coding) 2 3
  • Linc-Ppara 3

External Ids for MIRLET7BHG Gene

Previous GeneCards Identifiers for MIRLET7BHG Gene

  • GC00U927125
  • GC22P046482

Summaries for MIRLET7BHG Gene

GeneCards Summary for MIRLET7BHG Gene

MIRLET7BHG (MIRLET7B Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIRLET7BHG Gene

Genomics for MIRLET7BHG Gene

Genomic Location for MIRLET7BHG Gene

Chromosome:
22
Start:
46,053,869 bp from pter
End:
46,113,928 bp from pter
Size:
60,060 bases
Orientation:
Plus strand

Genomic View for MIRLET7BHG Gene

Genes around MIRLET7BHG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIRLET7BHG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIRLET7BHG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIRLET7BHG Gene

No data available for Regulatory Elements for MIRLET7BHG Gene

Proteins for MIRLET7BHG Gene

Post-translational modifications for MIRLET7BHG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIRLET7BHG Gene

Domains & Families for MIRLET7BHG Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIRLET7BHG Gene

Function for MIRLET7BHG Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIRLET7BHG Gene

Localization for MIRLET7BHG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIRLET7BHG Gene

Pathways & Interactions for MIRLET7BHG Gene

SuperPathways for MIRLET7BHG Gene

No Data Available

Interacting Proteins for MIRLET7BHG Gene

Gene Ontology (GO) - Biological Process for MIRLET7BHG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIRLET7BHG Gene

Drugs & Compounds for MIRLET7BHG Gene

No Compound Related Data Available

Transcripts for MIRLET7BHG Gene

mRNA/cDNA for MIRLET7BHG Gene

Unigene Clusters for MIRLET7BHG Gene

MIRLET7B host gene (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MIRLET7BHG Gene

No ASD Table

Relevant External Links for MIRLET7BHG Gene

GeneLoc Exon Structure for
MIRLET7BHG
ECgene alternative splicing isoforms for
MIRLET7BHG

Expression for MIRLET7BHG Gene

mRNA expression in normal human tissues for MIRLET7BHG Gene

SOURCE GeneReport for Unigene cluster for MIRLET7BHG Gene Hs.235838

genes like me logo Genes that share expression patterns with MIRLET7BHG: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIRLET7BHG Gene

Orthologs for MIRLET7BHG Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIRLET7BHG Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 96 (a)
OneToOne
Species with no ortholog for MIRLET7BHG:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIRLET7BHG Gene

ENSEMBL:
Gene Tree for MIRLET7BHG (if available)
TreeFam:
Gene Tree for MIRLET7BHG (if available)

Paralogs for MIRLET7BHG Gene

No data available for Paralogs for MIRLET7BHG Gene

Variants for MIRLET7BHG Gene

Sequence variations from dbSNP and Humsavar for MIRLET7BHG Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type
rs742901 -- 46,099,414(+) TGCCC(C/T)GGGGC intron-variant
rs742902 -- 46,099,181(+) GATGA(A/T)TCTTG intron-variant
rs2295156 -- 46,100,486(-) GCCAA(A/G)GCCTC intron-variant
rs873492 -- 46,102,010(-) GCTTG(G/T)CCCAC intron-variant
rs910360 -- 46,106,425(-) CCAAC(A/G)TTGTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for MIRLET7BHG Gene

Variant ID Type Subtype PubMed ID
dgv5004n71 CNV Loss 21882294
dgv5005n71 CNV Loss 21882294
nsv829281 CNV Gain 20364138
dgv5006n71 CNV Loss 21882294
dgv776n67 CNV Gain 20364138
dgv5008n71 CNV Loss 21882294
nsv829285 CNV Gain 20364138
nsv471212 CNV Loss 18288195
dgv5009n71 CNV Loss 21882294
dgv777n67 CNV Gain 20364138
dgv5010n71 CNV Loss 21882294
nsv915336 CNV Loss 21882294
nsv471213 CNV Gain 18288195
nsv459904 CNV Loss 19166990
nsv915337 CNV Loss 21882294
dgv5011n71 CNV Loss 21882294
nsv516279 CNV Loss 19592680
nsv915340 CNV Loss 21882294
dgv5012n71 CNV Loss 21882294
esv25384 CNV Gain 19812545
esv2661950 CNV Deletion 23128226
esv1346561 CNV Insertion 17803354
esv2724423 CNV Deletion 23290073
esv1011338 CNV Deletion 20482838
nsv915344 CNV Loss 21882294
nsv459905 CNV Loss 19166990
esv271386 CNV Insertion 20981092
nsv834224 CNV Loss 17160897

Relevant External Links for MIRLET7BHG Gene

HapMap Linkage Disequilibrium report
MIRLET7BHG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIRLET7BHG Gene

Disorders for MIRLET7BHG Gene

Relevant External Links for MIRLET7BHG

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIRLET7BHG

No disorders were found for MIRLET7BHG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIRLET7BHG Gene

Publications for MIRLET7BHG Gene

  1. Multiple knockout mouse models reveal lincRNAs are required for life and brain development. (PMID: 24381249) Sauvageau M. … Rinn J.L. (Elife 2013) 2 3 67
  2. Cytoplasmic sequestration of HDAC7 from mitochondrial and nuclear compartments upon initiation of apoptosis. (PMID: 15364908) Bakin R.E. … Jung M.O. (J. Biol. Chem. 2004) 2 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3

Products for MIRLET7BHG Gene

Sources for MIRLET7BHG Gene

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