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Aliases for MIR99AHG Gene

Subcategory (RNA class) for MIR99AHG Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR99AHG Gene

  • Mir-99a-Let-7c Cluster Host Gene 2 3 5
  • Mir-99a-Let-7c Cluster Host Gene (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 478 2 3
  • Megakaryocytic Oncogenic Non-Coding RNA 2 3
  • Chromosome 21 Open Reading Frame 35 2
  • Chromosome 21 Open Reading Frame 34 2
  • LINC00478 3
  • C21orf34 3
  • C21orf35 3
  • MONC 3

External Ids for MIR99AHG Gene

Previous HGNC Symbols for MIR99AHG Gene

  • C21orf35
  • FLJ38295
  • C21orf34
  • LINC00478

Summaries for MIR99AHG Gene

GeneCards Summary for MIR99AHG Gene

MIR99AHG (Mir-99a-Let-7c Cluster Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR99AHG Gene

Genomics for MIR99AHG Gene

Regulatory Elements for MIR99AHG Gene

Enhancers for MIR99AHG Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around MIR99AHG on UCSC Golden Path with GeneCards custom track

Promoters for MIR99AHG Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around MIR99AHG on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR99AHG Gene

Chromosome:
21
Start:
16,070,522 bp from pter
End:
16,627,397 bp from pter
Size:
556,876 bases
Orientation:
Plus strand

Genomic View for MIR99AHG Gene

Genes around MIR99AHG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR99AHG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR99AHG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR99AHG Gene

Proteins for MIR99AHG Gene

Post-translational modifications for MIR99AHG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR99AHG Gene

Domains & Families for MIR99AHG Gene

Gene Families for MIR99AHG Gene

Suggested Antigen Peptide Sequences for MIR99AHG Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR99AHG: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for MIR99AHG Gene

Function for MIR99AHG Gene

genes like me logo Genes that share phenotypes with MIR99AHG: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR99AHG Gene

Localization for MIR99AHG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR99AHG Gene

Pathways & Interactions for MIR99AHG Gene

SuperPathways for MIR99AHG Gene

No Data Available

Interacting Proteins for MIR99AHG Gene

Gene Ontology (GO) - Biological Process for MIR99AHG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR99AHG Gene

Drugs & Compounds for MIR99AHG Gene

No Compound Related Data Available

Transcripts for MIR99AHG Gene

Alternative Splicing Database (ASD) splice patterns (SP) for MIR99AHG Gene

No ASD Table

Relevant External Links for MIR99AHG Gene

GeneLoc Exon Structure for
MIR99AHG
ECgene alternative splicing isoforms for
MIR99AHG

Expression for MIR99AHG Gene

mRNA expression in normal human tissues for MIR99AHG Gene

genes like me logo Genes that share expression patterns with MIR99AHG: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR99AHG Gene

Orthologs for MIR99AHG Gene

Evolution for MIR99AHG Gene

ENSEMBL:
Gene Tree for MIR99AHG (if available)
TreeFam:
Gene Tree for MIR99AHG (if available)

No data available for Orthologs for MIR99AHG Gene

Paralogs for MIR99AHG Gene

No data available for Paralogs for MIR99AHG Gene

Variants for MIR99AHG Gene

Sequence variations from dbSNP and Humsavar for MIR99AHG Gene

SNP ID Clin Chr 21 pos Sequence Context AA Info Type
rs1074741 -- 16,402,516(-) gatag(C/T)ggata intron-variant
rs1116871 -- 16,444,058(+) ccttc(A/T)gcact intron-variant
rs1118873 -- 16,100,202(+) aacct(A/G)cagat intron-variant
rs238943 -- 16,306,866(+) CATAA(C/T)GAAAG intron-variant
rs238944 -- 16,352,509(-) ccata(C/T)gtgtc intron-variant

Relevant External Links for MIR99AHG Gene

HapMap Linkage Disequilibrium report
MIR99AHG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR99AHG Gene

Disorders for MIR99AHG Gene

Relevant External Links for MIR99AHG

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR99AHG

No disorders were found for MIR99AHG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR99AHG Gene

Publications for MIR99AHG Gene

  1. LincRNAs MONC and MIR100HG act as oncogenes in acute megakaryoblastic leukemia. (PMID: 25027842) Emmrich S. … Klusmann J.H. (Mol. Cancer 2014) 2 3 67
  2. Annotation of human chromosome 21 for relevance to Down syndrome: gene structure and expression analysis. (PMID: 12036298) Gardiner K. … Davisson M. (Genomics 2002) 2 3
  3. A genome wide association study (GWAS) providing evidence of an association between common genetic variants and late radiotherapy toxicity. (PMID: 24785509) Barnett G.C. … West C.M. (Radiother Oncol 2014) 3
  4. Genome-wide association analysis of blood biomarkers in chronic obstructive pulmonary disease. (PMID: 23144326) Kim D.K. … Silverman E.K. (Am. J. Respir. Crit. Care Med. 2012) 3
  5. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3

Products for MIR99AHG Gene

Sources for MIR99AHG Gene

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