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Aliases for MIR99AHG Gene

Subcategory (RNA class) for MIR99AHG Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR99AHG Gene

  • Mir-99a-Let-7c Cluster Host Gene 2 3
  • Mir-99a-Let-7c Cluster Host Gene (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 478 2 3
  • Megakaryocytic Oncogenic Non-Coding RNA 2 3
  • Chromosome 21 Open Reading Frame 35 2
  • Chromosome 21 Open Reading Frame 34 2
  • LINC00478 3
  • C21orf34 3
  • C21orf35 3
  • FLJ38295 3
  • MONC 3

External Ids for MIR99AHG Gene

Previous HGNC Symbols for MIR99AHG Gene

  • C21orf35
  • FLJ38295
  • C21orf34
  • LINC00478

Summaries for MIR99AHG Gene

GeneCards Summary for MIR99AHG Gene

MIR99AHG (Mir-99a-Let-7c Cluster Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR99AHG Gene

Genomics for MIR99AHG Gene

Genomic Location for MIR99AHG Gene

Start:
16,070,522 bp from pter
End:
16,627,397 bp from pter
Size:
556,876 bases
Orientation:
Plus strand

Genomic View for MIR99AHG Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR99AHG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR99AHG Gene

No data available for Regulatory Elements for MIR99AHG Gene

Proteins for MIR99AHG Gene

Post-translational modifications for MIR99AHG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR99AHG Gene

Domains for MIR99AHG Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR99AHG Gene

Function for MIR99AHG Gene

Phenotypes for MIR99AHG Gene

GenomeRNAi human phenotypes for MIR99AHG:
genes like me logo Genes that share phenotypes with MIR99AHG: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR99AHG Gene

Localization for MIR99AHG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR99AHG Gene

Pathways for MIR99AHG Gene

SuperPathways for MIR99AHG Gene

No Data Available

Interacting Proteins for MIR99AHG Gene

Gene Ontology (GO) - Biological Process for MIR99AHG Gene

None

No data available for Pathways by source for MIR99AHG Gene

Transcripts for MIR99AHG Gene

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MIR99AHG

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for MIR99AHG
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR99AHG Gene

No ASD Table

Relevant External Links for MIR99AHG Gene

GeneLoc Exon Structure for
MIR99AHG
ECgene alternative splicing isoforms for
MIR99AHG

Expression for MIR99AHG Gene

mRNA expression in normal human tissues for MIR99AHG Gene

genes like me logo Genes that share expressions with MIR99AHG: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR99AHG Gene

Orthologs for MIR99AHG Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for MIR99AHG Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia 2810055G20Rik 16
Species with no ortholog for MIR99AHG:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR99AHG Gene

ENSEMBL:
Gene Tree for MIR99AHG (if available)
TreeFam:
Gene Tree for MIR99AHG (if available)

Paralogs for MIR99AHG Gene

No data available for Paralogs for MIR99AHG Gene

Variants for MIR99AHG Gene

Sequence variations from dbSNP and Humsavar for MIR99AHG Gene

SNP ID Clin Chr 21 pos Sequence Context AA Info Type MAF
rs1533 -- 16,234,787(-) GGGAT(A/G)AAGAC intron-variant
rs1534 -- 16,234,751(-) TTCAG(A/G)TCATC intron-variant
rs151554 -- 16,296,135(+) gctca(C/G)tgcaa intron-variant
rs151555 -- 16,296,211(+) cccgc(A/C/G/T)accac intron-variant
rs151577 -- 16,295,226(-) ATGTA(G/T)ACACC intron-variant

Relevant External Links for MIR99AHG Gene

HapMap Linkage Disequilibrium report
MIR99AHG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for MIR99AHG Gene

Disorders for MIR99AHG Gene

No disorders were found for MIR99AHG Gene.

No data available for UniProtKB/Swiss-Prot for MIR99AHG Gene

Publications for MIR99AHG Gene

  1. Annotation of human chromosome 21 for relevance to Down syndrome: gene structure and expression analysis. (PMID: 12036298) Gardiner K. … Davisson M. (Genomics 2002) 2 3
  2. LincRNAs MONC and MIR100HG act as oncogenes in acute megakaryoblastic leukemia. (PMID: 25027842) Emmrich S. … Klusmann J.H. (Mol. Cancer 2014) 2 3
  3. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3
  4. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M. … Yaspo M.-L. (Nature 2000) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for MIR99AHG Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MIR99AHG
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for MIR99AHG
    • Block miRNA regulation of MIR99AHG using miScript Target Protectors

    Sources for MIR99AHG Gene

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