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Aliases for MIR99A Gene

Subcategory (RNA class) for MIR99A Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR99A Gene

  • MicroRNA 99a 2 3
  • Hsa-Mir-99a 3
  • MIRN99A 3

External Ids for MIR99A Gene

Previous HGNC Symbols for MIR99A Gene

  • MIRN99A

Previous GeneCards Identifiers for MIR99A Gene

  • GC21P016841
  • GC21P017911

Summaries for MIR99A Gene

Entrez Gene Summary for MIR99A Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR99A Gene

MIR99A (MicroRNA 99a) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are MicroRNAs in cancer.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR99A Gene

Genomics for MIR99A Gene

Genomic Location for MIR99A Gene

Start:
16,539,089 bp from pter
End:
16,539,169 bp from pter
Size:
81 bases
Orientation:
Plus strand

Genomic View for MIR99A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR99A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR99A Gene

No data available for Regulatory Elements for MIR99A Gene

Proteins for MIR99A Gene

Post-translational modifications for MIR99A Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR99A Gene

Domains for MIR99A Gene

Gene Families for MIR99A Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR99A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR99A Gene

Function for MIR99A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR99A Gene

Localization for MIR99A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR99A Gene

Pathways for MIR99A Gene

SuperPathways for MIR99A Gene

Superpath Contained pathways
1 MicroRNAs in cancer
genes like me logo Genes that share pathways with MIR99A: view

Pathways by source for MIR99A Gene

1 KEGG pathway for MIR99A Gene

Interacting Proteins for MIR99A Gene

Gene Ontology (GO) - Biological Process for MIR99A Gene

None

Transcripts for MIR99A Gene

mRNA/cDNA for MIR99A Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MIR99A

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR99A Gene

No ASD Table

Relevant External Links for MIR99A Gene

GeneLoc Exon Structure for
MIR99A
ECgene alternative splicing isoforms for
MIR99A

Expression for MIR99A Gene

mRNA expression in normal human tissues for MIR99A Gene

genes like me logo Genes that share expressions with MIR99A: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR99A Gene

Orthologs for MIR99A Gene

This gene was present in the common ancestor of chordates.

Orthologs for MIR99A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-99a 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia bta-mir-99a 36
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia cfa-mir-99a-1 36
  • 95 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mir99a 36
  • 97 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia oan-mir-99 36
  • 72 (a)
OneToOne
chicken
(Gallus gallus)
Aves gga-mir-99a 36
  • 93 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia aca-mir-99a 36
  • 78 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii dre-mir-99-1 36
  • 79 (a)
OneToMany
mir99-2 36
  • 80 (a)
OneToMany
Species with no ortholog for MIR99A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for MIR99A Gene

ENSEMBL:
Gene Tree for MIR99A (if available)
TreeFam:
Gene Tree for MIR99A (if available)

Paralogs for MIR99A Gene

No data available for Paralogs for MIR99A Gene

Variants for MIR99A Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR99A Gene

Variant ID Type Subtype PubMed ID
esv2723192 CNV Deletion 23290073

Relevant External Links for MIR99A Gene

HapMap Linkage Disequilibrium report
MIR99A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for MIR99A Gene

Disorders for MIR99A Gene

No disorders were found for MIR99A Gene.

No data available for UniProtKB/Swiss-Prot for MIR99A Gene

Publications for MIR99A Gene

  1. Homozygous deletion scanning of the lung cancer genome at a 100-kb resolution. (PMID: 17674361) Nagayama K. … Yokota J. (Genes Chromosomes Cancer 2007) 23
  2. miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs. (PMID: 11914277) Mourelatos Z. … Dreyfuss G. (Genes Dev. 2002) 3
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  4. A mammalian microRNA expression atlas based on small RNA library sequencing. (PMID: 17604727) Landgraf P. … Tuschl T. (Cell 2007) 3
  5. Patterns of known and novel small RNAs in human cervical cancer. (PMID: 17616659) Lui W.O. … Fire A. (Cancer Res. 2007) 3

Products for MIR99A Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MIR99A
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for MIR99A
    • Block miRNA regulation of MIR99A using miScript Target Protectors

    Sources for MIR99A Gene

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