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Aliases for MIR944 Gene

Subcategory (RNA class) for MIR944 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR944 Gene

  • MicroRNA 944 2 3 5
  • Hsa-Mir-944 3
  • Mir-944 3
  • MIRN944 3

External Ids for MIR944 Gene

Previous HGNC Symbols for MIR944 Gene

  • MIRN944

Previous GeneCards Identifiers for MIR944 Gene

  • GC03P191032
  • GC03P189547

Summaries for MIR944 Gene

Entrez Gene Summary for MIR944 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR944 Gene

MIR944 (MicroRNA 944) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR944 Gene

Genomics for MIR944 Gene

Regulatory Elements for MIR944 Gene

Enhancers for MIR944 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F189852 0.9 FANTOM5 11.9 +22.2 22216 0.0 ZBTB33 MIR944 TP63 MTAPP2
GH03F189788 1 FANTOM5 Ensembl ENCODE 11.1 -38.6 -38610 4.8 RFX1 PKNOX1 MTA2 JUNB BMI1 TBX21 ZBTB40 CBX5 IKZF1 FOXP2 MIR944 TP63 GC03P189814 ENSG00000227971
GH03F189861 0.2 ENCODE 10.9 +32.8 32835 2.4 STAT1 JUN CEBPB STAT3 MAX RCOR1 EP300 MIR944 MTAPP2
GH03F189778 0.5 ENCODE 10.7 -49.4 -49429 3.2 GTF2F1 CEBPG RAD21 RFX5 GATA3 SMC3 RCOR1 NFE2 MAFK NFE2L2 MIR944 GC03P189814 ENSG00000227971
GH03F189714 1.2 Ensembl ENCODE 10.6 -114.8 -114769 1.1 EP300 MIR944 TPRG1-AS2 TP63 ENSG00000227971 GC03P189814
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR944 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR944 Gene

Chromosome:
3
Start:
189,829,922 bp from pter
End:
189,830,009 bp from pter
Size:
88 bases
Orientation:
Plus strand

Genomic View for MIR944 Gene

Genes around MIR944 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR944 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR944 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR944 Gene

Proteins for MIR944 Gene

Post-translational modifications for MIR944 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR944 Gene

Domains & Families for MIR944 Gene

Gene Families for MIR944 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR944: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR944 Gene

Function for MIR944 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR944 Gene

Localization for MIR944 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR944 Gene

Pathways & Interactions for MIR944 Gene

SuperPathways for MIR944 Gene

No Data Available

Interacting Proteins for MIR944 Gene

Gene Ontology (GO) - Biological Process for MIR944 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR944 Gene

Transcripts for MIR944 Gene

mRNA/cDNA for MIR944 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR944 Gene

No ASD Table

Relevant External Links for MIR944 Gene

GeneLoc Exon Structure for
MIR944
ECgene alternative splicing isoforms for
MIR944

Expression for MIR944 Gene

mRNA expression in normal human tissues for MIR944 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR944 Gene:

MIR944
genes like me logo Genes that share expression patterns with MIR944: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR944 Gene

Orthologs for MIR944 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR944 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-944 35
  • 100 (a)
OneToOne
Species where no ortholog for MIR944 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR944 Gene

ENSEMBL:
Gene Tree for MIR944 (if available)
TreeFam:
Gene Tree for MIR944 (if available)

Paralogs for MIR944 Gene

No data available for Paralogs for MIR944 Gene

Variants for MIR944 Gene

Sequence variations from dbSNP and Humsavar for MIR944 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs111268349 -- 189,828,658(+) TTTAT(C/T)GGTTT intron-variant, upstream-variant-2KB
rs112099300 -- 189,828,879(+) ACGGA(A/G)GCATC intron-variant, upstream-variant-2KB
rs112204684 -- 189,828,134(+) TACTC(A/G)GGAAG intron-variant, upstream-variant-2KB
rs113148225 -- 189,830,312(+) CAAAA(C/G)AAAAC intron-variant, downstream-variant-500B
rs113852212 -- 189,829,437(+) TCCCT(A/G)TATGT intron-variant, upstream-variant-2KB

Relevant External Links for MIR944 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR944

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR944 Gene

Disorders for MIR944 Gene

Relevant External Links for MIR944

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR944

No disorders were found for MIR944 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR944 Gene

Publications for MIR944 Gene

  1. Novel functions and targets of miR-944 in human cervical cancer cells. (PMID: 25156441) Xie H. … Lui W.O. (Int. J. Cancer 2015) 3 64
  2. Plasma circulating microRNA-944 and microRNA-3662 as potential histologic type-specific early lung cancer biomarkers. (PMID: 26079400) PowrA^zek T. … Milanowski J. (Transl Res 2015) 3 64
  3. I9Np63 intronic miR-944 is implicated in the I9Np63-mediated induction of epidermal differentiation. (PMID: 26202967) Kim K.H. … Lee T.R. (Nucleic Acids Res. 2015) 3 64
  4. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  5. Patterns of known and novel small RNAs in human cervical cancer. (PMID: 17616659) Lui W.O. … Fire A. (Cancer Res. 2007) 3 64

Products for MIR944 Gene

Sources for MIR944 Gene

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