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Aliases for MIR941-1 Gene

Subcategory (RNA class) for MIR941-1 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR941-1 Gene

  • MicroRNA 941-1 2 3 5
  • Hsa-Mir-941-1 3
  • Mir-941-1 3
  • MIRN941-1 3

External Ids for MIR941-1 Gene

Previous HGNC Symbols for MIR941-1 Gene

  • MIRN941-1

Previous GeneCards Identifiers for MIR941-1 Gene

  • GC20P062040
  • GC20P062050
  • GC20P062551
  • GC20P059284
  • GC20P063922
  • GC20P063952
  • GC20P063988
  • GC20P064008

Summaries for MIR941-1 Gene

Entrez Gene Summary for MIR941-1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR941-1 Gene

MIR941-1 (MicroRNA 941-1) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR941-1 Gene

Genomics for MIR941-1 Gene

Regulatory Elements for MIR941-1 Gene

Enhancers for MIR941-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20F063910 0.8 Ensembl ENCODE 9.7 -7.4 -7362 3.0 PKNOX1 CBX3 SIN3A THRB RARA CBX5 FOS EGR2 SP5 PPARG MIR941-1 RNU1-134P
GH20F063893 1 FANTOM5 Ensembl ENCODE 9.6 -21.6 -21558 7.8 HDGF PKNOX1 ARNT MLX WRNIP1 ARID4B SIN3A DMAP1 SLC30A9 ZNF766 MIR647 MIR1914 GMEB2 PRPF6 RGS19 RTEL1 OPRL1 ZBTB46 C20orf181 FNDC11
GH20F063902 0.7 Ensembl ENCODE 9.5 -15.9 -15946 2.2 HDGF HDAC1 ATF1 PKNOX1 TBL1XR1 NFRKB KLF17 ZBTB40 GLIS2 SCRT2 RTEL1 ARFGAP1 FNDC11 SRMS ZBTB46 ZBTB46-AS1 ENSG00000229299 C20orf181 TNFRSF6B OPRL1
GH20F063926 0.2 ENCODE 5.7 +7.5 7462 0.9 ZNF263 RFX1 MAZ ZNF687 SIN3A MAFG ZHX2 MNT ZIC2 MBD2 ZNF512B MIR1914 PRPF6 SAMD10 UCKL1 ZBTB46 ENSG00000229299 LIME1 SLC2A4RG ZGPAT
GH20F063909 0.2 ENCODE 0.4 -9.4 -9430 0.6 CTCF SAP130 ARID4B MAX ZNF48 ZNF2 RAD21 ZNF143 SMC3 ZNF600 UCKL1 RNU1-134P MIR941-1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR941-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR941-1 Gene

Chromosome:
20
Start:
63,919,449 bp from pter
End:
63,919,520 bp from pter
Size:
72 bases
Orientation:
Plus strand

Genomic View for MIR941-1 Gene

Genes around MIR941-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR941-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR941-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR941-1 Gene

Proteins for MIR941-1 Gene

Post-translational modifications for MIR941-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR941-1 Gene

Domains & Families for MIR941-1 Gene

Gene Families for MIR941-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR941-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR941-1 Gene

Function for MIR941-1 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR941-1 Gene

Localization for MIR941-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR941-1 Gene

Pathways & Interactions for MIR941-1 Gene

SuperPathways for MIR941-1 Gene

No Data Available

Interacting Proteins for MIR941-1 Gene

Gene Ontology (GO) - Biological Process for MIR941-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR941-1 Gene

Transcripts for MIR941-1 Gene

mRNA/cDNA for MIR941-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR941-1 Gene

No ASD Table

Relevant External Links for MIR941-1 Gene

GeneLoc Exon Structure for
MIR941-1
ECgene alternative splicing isoforms for
MIR941-1

Expression for MIR941-1 Gene

mRNA expression in normal human tissues for MIR941-1 Gene

genes like me logo Genes that share expression patterns with MIR941-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR941-1 Gene

Orthologs for MIR941-1 Gene

Evolution for MIR941-1 Gene

ENSEMBL:
Gene Tree for MIR941-1 (if available)
TreeFam:
Gene Tree for MIR941-1 (if available)

No data available for Orthologs for MIR941-1 Gene

Paralogs for MIR941-1 Gene

No data available for Paralogs for MIR941-1 Gene

Variants for MIR941-1 Gene

Sequence variations from dbSNP and Humsavar for MIR941-1 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
rs111246522 -- 63,919,695(+) GGCCC(A/G)GGACA intron-variant, nc-transcript-variant, downstream-variant-500B, upstream-variant-2KB, utr-variant-5-prime
rs111449344 -- 63,919,212(+) AGGGA(C/T)CTGCT intron-variant, upstream-variant-2KB
rs111479365 -- 63,919,506(+) GCTGT(A/G)TGCAC intron-variant, nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs111549668 -- 63,919,651(+) CGCCA(C/T)GGAAG intron-variant, nc-transcript-variant, downstream-variant-500B, upstream-variant-2KB, utr-variant-5-prime
rs111586745 -- 63,919,925(+) GCTGT(A/G)TGCAC intron-variant, nc-transcript-variant, downstream-variant-500B, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for MIR941-1 Gene

Variant ID Type Subtype PubMed ID
nsv428381 CNV gain+loss 18775914
nsv469773 CNV gain 16826518
nsv509784 CNV insertion 20534489
nsv9829 CNV gain 18304495

Relevant External Links for MIR941-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR941-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR941-1 Gene

Disorders for MIR941-1 Gene

Relevant External Links for MIR941-1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR941-1

No disorders were found for MIR941-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR941-1 Gene

Publications for MIR941-1 Gene

  1. Epigenetically regulated MIR941 and MIR1247 target gastric cancer cell growth and migration. (PMID: 24785261) Kim J.G. … Yi J.M. (Epigenetics 2014) 3 64
  2. Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array. (PMID: 23535732) Eeles R.A. … Easton D.F. (Nat. Genet. 2013) 3 64
  3. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  4. Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors. (PMID: 19784364) Goff L.A. … Hart R.P. (PLoS ONE 2009) 3 64
  5. Patterns of known and novel small RNAs in human cervical cancer. (PMID: 17616659) Lui W.O. … Fire A. (Cancer Res. 2007) 3 64

Products for MIR941-1 Gene

Sources for MIR941-1 Gene

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