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Aliases for MIR936 Gene

Subcategory (RNA class) for MIR936 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR936 Gene

  • MicroRNA 936 2 3 5
  • Hsa-Mir-936 3
  • MIRN936 3

External Ids for MIR936 Gene

Previous HGNC Symbols for MIR936 Gene

  • MIRN936

Previous GeneCards Identifiers for MIR936 Gene

  • GC10M105799

Summaries for MIR936 Gene

Entrez Gene Summary for MIR936 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR936 Gene

MIR936 (MicroRNA 936) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are Degradation of the extracellular matrix and Collagen chain trimerization.

Additional gene information for MIR936 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR936 Gene

Genomics for MIR936 Gene

GeneHancer (GH) Regulatory Elements for MIR936 Gene

Promoters and enhancers for MIR936 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I104048 Enhancer 0.7 Ensembl ENCODE 550.8 -1.6 -1632 1.8 FOXA2 POLR2A JUN RARA TCF7L2 MIR936 CFAP43 GSTO2 GC10M104086 COL17A1 GC10M104085
GH10I104115 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 10.7 -71.4 -71350 8.3 HDGF PKNOX1 SMAD1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 POLR2B SFR1 PDCD11 ENSG00000260461 MIR936 CFAP43 COL17A1
GH10I103887 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 10.7 +158.7 158705 4.2 PKNOX1 CLOCK FOXA2 NEUROD1 SIN3A ZNF2 ZNF48 ARID2 ZNF143 FOS GC10M103885 SLK SH3PXD2A MIR936 ENSG00000260461 STN1 COL17A1 SFR1 GSTO2 GSTO1
GH10I103892 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.7 +153.5 153515 4.8 FEZF1 ZNF2 BRCA1 GTF3C2 KLF13 SP3 RXRA YY2 TSHZ1 ZNF488 STN1 SLK SH3PXD2A MIR936 COL17A1 GC10M103885
GH10I104109 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 11.2 -62.0 -61968 1.6 HDAC1 MEIS2 PKNOX1 FOXA2 JUN SIN3A EBF1 FOSL1 PRDM10 FOSL2 SFR1 COL17A1 MIR936 STN1 CFAP43 GSTO1 CFAP58 SLK
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR936 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR936 Gene

Genomic Locations for MIR936 Gene
chr10:104,048,089-104,048,186
(GRCh38/hg38)
Size:
98 bases
Orientation:
Minus strand
chr10:105,807,847-105,807,944
(GRCh37/hg19)

Genomic View for MIR936 Gene

Genes around MIR936 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR936 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR936 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR936 Gene

Proteins for MIR936 Gene

Post-translational modifications for MIR936 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR936 Gene

Domains & Families for MIR936 Gene

Gene Families for MIR936 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR936: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR936 Gene

Function for MIR936 Gene

Phenotypes From GWAS Catalog for MIR936 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR936 Gene

Localization for MIR936 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR936 Gene

Pathways & Interactions for MIR936 Gene

genes like me logo Genes that share pathways with MIR936: view

Interacting Proteins for MIR936 Gene

Gene Ontology (GO) - Biological Process for MIR936 Gene

None

No data available for SIGNOR curated interactions for MIR936 Gene

Drugs & Compounds for MIR936 Gene

No Compound Related Data Available

Transcripts for MIR936 Gene

mRNA/cDNA for MIR936 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR936 Gene

No ASD Table

Relevant External Links for MIR936 Gene

GeneLoc Exon Structure for
MIR936
ECgene alternative splicing isoforms for
MIR936

Expression for MIR936 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR936 Gene

mRNA differential expression in normal tissues according to GTEx for MIR936 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x26.0) and Skin - Sun Exposed (Lower leg) (x20.1).

NURSA nuclear receptor signaling pathways regulating expression of MIR936 Gene:

MIR936
genes like me logo Genes that share expression patterns with MIR936: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR936 Gene

Orthologs for MIR936 Gene

Evolution for MIR936 Gene

ENSEMBL:
Gene Tree for MIR936 (if available)
TreeFam:
Gene Tree for MIR936 (if available)

No data available for Orthologs for MIR936 Gene

Paralogs for MIR936 Gene

No data available for Paralogs for MIR936 Gene

Variants for MIR936 Gene

Sequence variations from dbSNP and Humsavar for MIR936 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs139559170 likely-benign, Epidermolysis bullosa, junctional 104,049,428(-) G/A upstream_transcript_variant
rs1004423954 -- 104,047,964(-) C/T downstream_transcript_variant
rs1004435325 -- 104,048,281(-) C/T upstream_transcript_variant
rs1005933352 -- 104,048,334(-) T/C upstream_transcript_variant
rs1006992764 -- 104,049,458(-) C/T upstream_transcript_variant

Additional Variant Information for MIR936 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR936

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR936 Gene

Disorders for MIR936 Gene

Additional Disease Information for MIR936

No disorders were found for MIR936 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR936 Gene

Publications for MIR936 Gene

  1. Patterns of known and novel small RNAs in human cervical cancer. (PMID: 17616659) Lui WO … Fire A (Cancer research 2007) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR936 Gene

Sources for MIR936 Gene

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