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Aliases for MIR935 Gene

Subcategory (RNA class) for MIR935 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR935 Gene

  • MicroRNA 935 2 3 5
  • Hsa-Mir-935 3
  • Mir-935 3
  • MIRN935 3

External Ids for MIR935 Gene

Previous HGNC Symbols for MIR935 Gene

  • MIRN935

Previous GeneCards Identifiers for MIR935 Gene

  • GC19P059179
  • GC19P054485

Summaries for MIR935 Gene

Entrez Gene Summary for MIR935 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR935 Gene

MIR935 (MicroRNA 935) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are Cardiac conduction and Trafficking of AMPA receptors.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR935 Gene

Genomics for MIR935 Gene

Regulatory Elements for MIR935 Gene

Enhancers for MIR935 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G053956 1.3 Ensembl ENCODE 12.5 -23.7 -23652 4.0 HDGF PKNOX1 CREB3L1 AGO1 ARID4B SIN3A DMAP1 ZNF207 PAF1 SP3 MIR935 CACNG6 ZNF525 ENSG00000237017 CACNG8 PIR36356
GH19G053840 1.3 Ensembl ENCODE 11.2 -140.2 -140179 2.7 PKNOX1 ATF1 ARNT ARID4B SIN3A YBX1 GATA2 ZNF143 FOS SP3 LOC105372457 ENSG00000232220 PRKCG MIR935 CACNG6 MIR1283-1 MIR520A MIR515-2 MIR519C MIR515-1
GH19G053851 1.3 FANTOM5 Ensembl ENCODE 11.2 -130.5 -130467 1.1 PTBP1 NFIA MIER1 NFIB BHLHE40 MAX EP300 NFIC PRDM4 MYC ENSG00000232220 PRKCG MIR935 CACNG6 MYADM VSTM1 LILRA5 OSCAR NLRP12 LILRB2
GH19G053945 1.1 ENCODE 12.3 -36.6 -36624 0.4 HDGF PKNOX1 ARNT AGO1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF765 MIR935 CACNG6 ENSG00000232220 PRKCG LOC105372457 LENG1 LENG8-AS1 RNU6-698P CACNG8
GH19G053848 1.2 FANTOM5 Ensembl ENCODE 11.2 -132.9 -132934 1.6 MEF2D ZNF146 SMARCA4 POLR2A IKZF1 CREM LOC105372457 ENSG00000232220 PRKCG MIR935 CACNG6 MYADM VSTM1 OSCAR NLRP12 LILRA5
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR935 on UCSC Golden Path with GeneCards custom track

Promoters for MIR935 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000111434 293 401 CTCF PKNOX1 POLR2A IKZF1 KLF9 EZH2
ENSR00000289135 -1907 401 ZNF133 SIN3A FEZF1 GLI4 ZNF2 ETS1 GLIS2 KLF7 ZNF263 SP3

Genomic Location for MIR935 Gene

Chromosome:
19
Start:
53,982,307 bp from pter
End:
53,982,397 bp from pter
Size:
91 bases
Orientation:
Plus strand

Genomic View for MIR935 Gene

Genes around MIR935 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR935 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR935 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR935 Gene

Proteins for MIR935 Gene

Post-translational modifications for MIR935 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR935 Gene

Domains & Families for MIR935 Gene

Gene Families for MIR935 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR935: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR935 Gene

Function for MIR935 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR935 Gene

Localization for MIR935 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR935 Gene

Pathways & Interactions for MIR935 Gene

genes like me logo Genes that share pathways with MIR935: view

Interacting Proteins for MIR935 Gene

Gene Ontology (GO) - Biological Process for MIR935 Gene

None

No data available for SIGNOR curated interactions for MIR935 Gene

Drugs & Compounds for MIR935 Gene

No Compound Related Data Available

Transcripts for MIR935 Gene

mRNA/cDNA for MIR935 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR935 Gene

No ASD Table

Relevant External Links for MIR935 Gene

GeneLoc Exon Structure for
MIR935
ECgene alternative splicing isoforms for
MIR935

Expression for MIR935 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR935 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR935 Gene:

MIR935
genes like me logo Genes that share expression patterns with MIR935: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR935 Gene

Orthologs for MIR935 Gene

Evolution for MIR935 Gene

ENSEMBL:
Gene Tree for MIR935 (if available)
TreeFam:
Gene Tree for MIR935 (if available)

No data available for Orthologs for MIR935 Gene

Paralogs for MIR935 Gene

No data available for Paralogs for MIR935 Gene

Variants for MIR935 Gene

Sequence variations from dbSNP and Humsavar for MIR935 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1001212732 -- 53,981,614(+) GACCA(A/T)CCAGG intron-variant, upstream-variant-2KB
rs1002247030 -- 53,980,896(+) TTTGC(A/G)TATTT intron-variant, upstream-variant-2KB
rs1002276725 -- 53,981,117(+) ACCAG(G/T)AGGGG intron-variant, upstream-variant-2KB
rs1002372288 -- 53,981,907(+) TCTGG(C/T)AGGAC intron-variant, upstream-variant-2KB
rs1002445762 -- 53,981,622(+) AGGGC(C/T)GTGTC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR935 Gene

Variant ID Type Subtype PubMed ID
dgv1815n106 CNV deletion 24896259
esv2718812 CNV deletion 23290073
nsv1063127 CNV gain 25217958
nsv458782 CNV gain 19166990
nsv580110 CNV gain 21841781
nsv580111 CNV loss 21841781
nsv833876 CNV loss 17160897
nsv833877 CNV loss 17160897
nsv953612 CNV deletion 24416366

Relevant External Links for MIR935 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR935

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR935 Gene

Disorders for MIR935 Gene

Relevant External Links for MIR935

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR935

No disorders were found for MIR935 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR935 Gene

Publications for MIR935 Gene

  1. miR-935 Promotes Liver Cancer Cell Proliferation and Migration by Targeting SOX7. (PMID: 27697092) Liu X. … Kan Q. (Oncol. Res. 2017) 3 64
  2. miR-935 suppresses gastric signet ring cell carcinoma tumorigenesis by targeting Notch1 expression. (PMID: 26742429) Yan C. … Zhou L. (Biochem. Biophys. Res. Commun. 2016) 3 64
  3. miR-935 promotes gastric cancer cell proliferation by targeting SOX7. (PMID: 27044823) Yang M. … Chen L. (Biomed. Pharmacother. 2016) 3 64
  4. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  5. Patterns of known and novel small RNAs in human cervical cancer. (PMID: 17616659) Lui W.O. … Fire A. (Cancer Res. 2007) 3 64

Products for MIR935 Gene

Sources for MIR935 Gene

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