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Aliases for MIR933 Gene

Subcategory (RNA class) for MIR933 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR933 Gene

  • MicroRNA 933 2 3 5
  • Hsa-Mir-933 3
  • Mir-933 3
  • MIRN933 3

External Ids for MIR933 Gene

Previous HGNC Symbols for MIR933 Gene

  • MIRN933

Previous GeneCards Identifiers for MIR933 Gene

  • GC02M175742
  • GC02M176032

Summaries for MIR933 Gene

Entrez Gene Summary for MIR933 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR933 Gene

MIR933 (MicroRNA 933) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR933 Gene

Genomics for MIR933 Gene

Regulatory Elements for MIR933 Gene

Enhancers for MIR933 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G175061 1 ENCODE 10.3 +104.8 104768 2.1 FOXA2 ATF1 MLX ZFP64 ARID4B DMAP1 ZNF48 TCF12 SLC30A9 CBX5 ATP5G3 CHRNA1 CHN1 ENSG00000229750 MIR933 ATF2 GC02M175073 RPL21P31
GH02G175036 0.9 Ensembl 9.9 +130.9 130909 0.4 ATF1 FOXA2 DMAP1 RAD21 RARA MIXL1 THAP11 ZNF654 PPARG NR2F2 CHN1 MIR933 ENSG00000229750 ATF2 WIPF1 RPL21P31 GC02M175073
GH02G175096 0.5 ENCODE 10.5 +70.2 70188 1.3 RFX1 FOS NFE2L2 ATP5G3 ATF2 MIR933 ENSG00000229750 ENSG00000277948 GC02P175143
GH02G175057 0.5 ENCODE 10 +110.4 110422 0.2 SSRP1 ATF3 TCF7 TCF7L2 CHN1 RNU6-763P MIR933 ENSG00000229750 ATF2 GC02M175073 RPL21P31
GH02G175165 1.2 ENCODE 0.7 +0.4 379 4.2 CREB3L1 AGO1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC ATP5G3 MIR933 GC02P175143
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR933 on UCSC Golden Path with GeneCards custom track

Promoters for MIR933 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000126686 -91 2801 CREB3L1 AGO1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC

Genomic Location for MIR933 Gene

Chromosome:
2
Start:
175,167,633 bp from pter
End:
175,167,709 bp from pter
Size:
77 bases
Orientation:
Minus strand

Genomic View for MIR933 Gene

Genes around MIR933 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR933 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR933 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR933 Gene

Proteins for MIR933 Gene

Post-translational modifications for MIR933 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR933 Gene

Domains & Families for MIR933 Gene

Gene Families for MIR933 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR933: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR933 Gene

Function for MIR933 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR933 Gene

Localization for MIR933 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR933 Gene

Pathways & Interactions for MIR933 Gene

SuperPathways for MIR933 Gene

No Data Available

Interacting Proteins for MIR933 Gene

Gene Ontology (GO) - Biological Process for MIR933 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR933 Gene

Drugs & Compounds for MIR933 Gene

No Compound Related Data Available

Transcripts for MIR933 Gene

mRNA/cDNA for MIR933 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR933 Gene

No ASD Table

Relevant External Links for MIR933 Gene

GeneLoc Exon Structure for
MIR933
ECgene alternative splicing isoforms for
MIR933

Expression for MIR933 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR933 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR933 Gene:

MIR933
genes like me logo Genes that share expression patterns with MIR933: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR933 Gene

Orthologs for MIR933 Gene

Evolution for MIR933 Gene

ENSEMBL:
Gene Tree for MIR933 (if available)
TreeFam:
Gene Tree for MIR933 (if available)

No data available for Orthologs for MIR933 Gene

Paralogs for MIR933 Gene

No data available for Paralogs for MIR933 Gene

Variants for MIR933 Gene

Sequence variations from dbSNP and Humsavar for MIR933 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1003214060 -- 175,168,733(+) GCCCA(C/G)CCCTT upstream-variant-2KB
rs1003656871 -- 175,168,330(+) TCAGG(A/C)TTAAG upstream-variant-2KB
rs1003908734 -- 175,168,887(+) ATTCA(A/G)TAAAT upstream-variant-2KB
rs1004030920 -- 175,168,554(+) TGAAG(A/G)GCTAG upstream-variant-2KB
rs1005494783 -- 175,167,913(+) GCTAA(C/G)GAGCA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR933 Gene

Variant ID Type Subtype PubMed ID
nsv1012709 CNV gain 25217958
nsv3044 CNV deletion 18451855

Relevant External Links for MIR933 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR933

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR933 Gene

Disorders for MIR933 Gene

Relevant External Links for MIR933

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR933

No disorders were found for MIR933 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR933 Gene

Publications for MIR933 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A. … Griffiths-Jones S. (Nucleic Acids Res. 2011) 3 64
  2. Patterns of known and novel small RNAs in human cervical cancer. (PMID: 17616659) Lui W.O. … Fire A. (Cancer Res. 2007) 3 64
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR933 Gene

Sources for MIR933 Gene

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