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Aliases for MIR885 Gene

Subcategory (RNA class) for MIR885 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR885 Gene

  • MicroRNA 885 2 3
  • Hsa-Mir-885 3
  • MIRN885 3

External Ids for MIR885 Gene

Previous Symbols for MIR885 Gene

  • MIRN885

Summaries for MIR885 Gene

Entrez Gene Summary for MIR885 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR885 Gene

MIR885 (MicroRNA 885) is a RNA Gene, and belongs to miRNA RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR885 Gene

Genomics for MIR885 Gene

Genomic Location for MIR885 Gene

Start:
10,394,481 bp from pter
End:
10,394,562 bp from pter
Size:
82 bases
Orientation:
Minus strand

Genomic View for MIR885 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR885 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR885 Gene

No data available for Regulatory Elements for MIR885 Gene

Proteins for MIR885 Gene

Post-translational modifications for MIR885 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR885 Gene

Domains for MIR885 Gene

Gene Families for MIR885 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs
genes like me logo Genes that share domains with MIR885: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for MIR885 Gene

Function for MIR885 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR885 Gene

Localization for MIR885 Gene

No data available for Gene Ontology (GO) - Cellular Components for MIR885 Gene

Pathways for MIR885 Gene

SuperPathways for MIR885 Gene

No Data Available

Interacting Proteins for MIR885 Gene

Gene Ontology (GO) - Biological Process for MIR885 Gene

None

No data available for Pathways by source for MIR885 Gene

Transcripts for MIR885 Gene

mRNA/cDNA for MIR885 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR885 Gene

No ASD Table

Relevant External Links for MIR885 Gene

GeneLoc Exon Structure for
MIR885
ECgene alternative splicing isoforms for
MIR885

Expression for MIR885 Gene

No Expression Related Data Available

Orthologs for MIR885 Gene

This gene was present in the common ancestor of mammals.

Orthologs for MIR885 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-885 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia bta-mir-885 37
  • 97 (a)
OneToOne
dog
(Canis familiaris)
Mammalia cfa-mir-885 37
  • 99 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia mdo-mir-885 37
  • 51 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 53 (a)
OneToOne
Species with no ortholog for MIR885:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR885 Gene

ENSEMBL:
Gene Tree for MIR885 (if available)
TreeFam:
Gene Tree for MIR885 (if available)

Paralogs for MIR885 Gene

No data available for Paralogs for MIR885 Gene

Variants for MIR885 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR885 Gene

Variant ID Type Subtype PubMed ID
dgv809e201 CNV Deletion 23290073
nsv436362 CNV Deletion 17901297
nsv436869 CNV Insertion 17901297
esv4117 CNV Complex 18987735
nsv508903 CNV Insertion 20534489
nsv876528 CNV Gain 21882294

Relevant External Links for MIR885 Gene

HapMap Linkage Disequilibrium report
MIR885

No data available for Sequence variations from dbSNP and Humsavar for MIR885 Gene

Disorders for MIR885 Gene

No disorders were found for MIR885 Gene.

No data available for UniProtKB/Swiss-Prot for MIR885 Gene

Publications for MIR885 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis. (PMID: 16954537) Berezikov E. … Cuppen E. (Genome Res. 2006) 3
  3. A mammalian microRNA expression atlas based on small RNA library sequencing. (PMID: 17604727) Landgraf P. … Tuschl T. (Cell 2007) 3
  4. MicroRNA miR-885-5p targets CDK2 and MCM5, activates p53 and inhibits proliferation and survival. (PMID: 21233845) Afanasyeva E.A. … Westermann F. (Cell Death Differ. 2011) 3
  5. miRNA expression profiling identifies DSPP regulators in cultured dental pulp cells. (PMID: 21687927) Huang X. … Wu B. (Int. J. Mol. Med. 2011) 3

Products for MIR885 Gene

Sources for MIR885 Gene

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