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Aliases for MIR873 Gene

Subcategory (RNA class) for MIR873 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR873 Gene

  • MicroRNA 873 2 3
  • Hsa-Mir-873 3
  • MIRN873 3

External Ids for MIR873 Gene

Previous Symbols for MIR873 Gene

  • MIRN873

Summaries for MIR873 Gene

Entrez Gene Summary for MIR873 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR873 Gene

MIR873 (MicroRNA 873) is a RNA Gene, and belongs to miRNA RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR873 Gene

Genomics for MIR873 Gene

Genomic Location for MIR873 Gene

Start:
28,888,856 bp from pter
End:
28,888,965 bp from pter
Size:
110 bases
Orientation:
Minus strand

Genomic View for MIR873 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR873 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR873 Gene

ORGUL Member Location for MIR873 Gene

ORGUL Member Location for MIR873 gene

No data available for Regulatory Elements for MIR873 Gene

Proteins for MIR873 Gene

Post-translational modifications for MIR873 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR873 Gene

Domains for MIR873 Gene

Gene Families for MIR873 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs
genes like me logo Genes that share domains with MIR873: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for MIR873 Gene

Function for MIR873 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR873 Gene

Localization for MIR873 Gene

No data available for Gene Ontology (GO) - Cellular Components for MIR873 Gene

Pathways for MIR873 Gene

SuperPathways for MIR873 Gene

No Data Available

Interacting Proteins for MIR873 Gene

Gene Ontology (GO) - Biological Process for MIR873 Gene

None

No data available for Pathways by source for MIR873 Gene

Transcripts for MIR873 Gene

mRNA/cDNA for MIR873 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR873 Gene

No ASD Table

Relevant External Links for MIR873 Gene

GeneLoc Exon Structure for
MIR873
ECgene alternative splicing isoforms for
MIR873

Expression for MIR873 Gene

mRNA expression in normal human tissues for MIR873 Gene

genes like me logo Genes that share expressions with MIR873: view

Orthologs for MIR873 Gene

This gene was present in the common ancestor of mammals.

Orthologs for MIR873 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-873 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia bta-mir-873 37
  • 97 (a)
OneToOne
dog
(Canis familiaris)
Mammalia -- 37
  • 100 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mir873 37
  • 95 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia mdo-mir-873 37
  • 86 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia oan-mir-873 37
  • 86 (a)
OneToOne
Species with no ortholog for MIR873:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR873 Gene

ENSEMBL:
Gene Tree for MIR873 (if available)
TreeFam:
Gene Tree for MIR873 (if available)

Paralogs for MIR873 Gene

No data available for Paralogs for MIR873 Gene

Variants for MIR873 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR873 Gene

Variant ID Type Subtype PubMed ID
nsv471296 CNV Loss 18288195
nsv892916 CNV Gain 21882294

Relevant External Links for MIR873 Gene

HapMap Linkage Disequilibrium report
MIR873

No data available for Sequence variations from dbSNP and Humsavar for MIR873 Gene

Disorders for MIR873 Gene

No disorders were found for MIR873 Gene.

No data available for UniProtKB/Swiss-Prot for MIR873 Gene

Publications for MIR873 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis. (PMID: 16954537) Berezikov E. … Cuppen E. (Genome Res. 2006) 3
  3. A mammalian microRNA expression atlas based on small RNA library sequencing. (PMID: 17604727) Landgraf P. … Tuschl T. (Cell 2007) 3

Products for MIR873 Gene

Sources for MIR873 Gene

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