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Aliases for MIR7111 Gene

Subcategory (RNA class) for MIR7111 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR7111 Gene

  • MicroRNA 7111 2 3 5
  • MicroRNA Mir-7111 3
  • Hsa-Mir-7111 3

External Ids for MIR7111 Gene

Previous GeneCards Identifiers for MIR7111 Gene

  • GC06U902556
  • GC06P035579
  • GC06P035587
  • GC06P037824
  • GC06P038459
  • GC06P039049
  • GC06P039637

Summaries for MIR7111 Gene

Entrez Gene Summary for MIR7111 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR7111 Gene

MIR7111 (MicroRNA 7111) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR7111 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR7111 Gene

Genomics for MIR7111 Gene

Regulatory Elements for MIR7111 Gene

Enhancers for MIR7111 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H035467 1.4 ENCODE dbSUPER 0.7 -0.4 -369 5 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC SSRP1 ZNF610 TAF11 BRPF3 ZNF76 ENSG00000272374 RPL10A FANCE PPARD RPS10P13 RN7SL502P ARMC12
GH06H035483 2.5 VISTA FANTOM5 Ensembl ENCODE dbSUPER 0.3 +22.1 22054 18 HDGF PKNOX1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 SLC30A9 ZNF766 FOS TEAD3 ENSG00000228559 TAF11 TULP1 UHRF1BP1 DEF6 MIR7111
GH06H035475 1 ENCODE dbSUPER 0.7 +2.8 2811 0 HDGF SAP130 ZNF384 ZIC2 THRB KMT2B HIC1 GLIS2 POLR2A ZBTB48 DEF6 MIR7111 TEAD3
GH06H035474 0.8 ENCODE dbSUPER 0.7 +4.0 3951 0 ZFP69B GLIS2 ZNF692 POLR2A GLIS1 PATZ1 PRDM10 MIR7111 TEAD3
GH06H035473 0.8 ENCODE dbSUPER 0.7 +3.5 3471 0 OSR2 POLR2A PATZ1 SCRT2 ZNF10 ZNF600 PRDM10 MIR7111 TEAD3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR7111 on UCSC Golden Path with GeneCards custom track

Promoters for MIR7111 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000196090 -1608 1801 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 SP3 SSRP1 ZNF610 GLIS1

Genomic Location for MIR7111 Gene

Chromosome:
6
Start:
35,470,508 bp from pter
End:
35,470,579 bp from pter
Size:
72 bases
Orientation:
Plus strand

Genomic View for MIR7111 Gene

Genes around MIR7111 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR7111 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR7111 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR7111 Gene

Proteins for MIR7111 Gene

Post-translational modifications for MIR7111 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR7111 Gene

Domains & Families for MIR7111 Gene

Gene Families for MIR7111 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR7111: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR7111 Gene

Function for MIR7111 Gene

Animal Model Products

miRNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR7111 Gene

Localization for MIR7111 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR7111 Gene

Pathways & Interactions for MIR7111 Gene

SuperPathways for MIR7111 Gene

No Data Available

Interacting Proteins for MIR7111 Gene

Gene Ontology (GO) - Biological Process for MIR7111 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR7111 Gene

Drugs & Compounds for MIR7111 Gene

No Compound Related Data Available

Transcripts for MIR7111 Gene

mRNA/cDNA for MIR7111 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR7111 Gene

No ASD Table

Relevant External Links for MIR7111 Gene

GeneLoc Exon Structure for
MIR7111
ECgene alternative splicing isoforms for
MIR7111

Expression for MIR7111 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR7111 Gene:

MIR7111
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR7111 Gene

Orthologs for MIR7111 Gene

Evolution for MIR7111 Gene

ENSEMBL:
Gene Tree for MIR7111 (if available)
TreeFam:
Gene Tree for MIR7111 (if available)

No data available for Orthologs for MIR7111 Gene

Paralogs for MIR7111 Gene

No data available for Paralogs for MIR7111 Gene

Variants for MIR7111 Gene

Sequence variations from dbSNP and Humsavar for MIR7111 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1000742892 -- 35,469,064(+) AGTGC(C/T)CCCGT intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1000818583 -- 35,469,256(+) GCCAG(A/G)CTGGC intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1001890787 -- 35,468,561(+) TTCTC(A/C)AGGCG intron-variant, upstream-variant-2KB
rs1003951962 -- 35,468,529(+) CGGAC(C/T)CTTGC intron-variant, upstream-variant-2KB
rs1004325449 -- 35,468,729(+) GACCT(C/G)GGAGG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR7111 Gene

Variant ID Type Subtype PubMed ID
nsv519370 CNV loss 19592680
nsv528351 CNV loss 19592680
nsv602910 CNV loss 21841781
nsv830641 CNV loss 17160897
nsv965717 CNV duplication 23825009

Relevant External Links for MIR7111 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR7111

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR7111 Gene

Disorders for MIR7111 Gene

Relevant External Links for MIR7111

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR7111

No disorders were found for MIR7111 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR7111 Gene

Publications for MIR7111 Gene

  1. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3 60
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR7111 Gene

Sources for MIR7111 Gene

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