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Aliases for MIR6775 Gene

Subcategory (RNA class) for MIR6775 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR6775 Gene

  • MicroRNA 6775 2 3 5
  • MicroRNA Mir-6775 3
  • Hsa-Mir-6775 3

External Ids for MIR6775 Gene

Previous GeneCards Identifiers for MIR6775 Gene

  • GC16U901794

Summaries for MIR6775 Gene

Entrez Gene Summary for MIR6775 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR6775 Gene

MIR6775 (MicroRNA 6775) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR6775 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR6775 Gene

Genomics for MIR6775 Gene

GeneHancer (GH) Regulatory Elements for MIR6775 Gene

Promoters and enhancers for MIR6775 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I087834 Enhancer 1 ENCODE dbSUPER 550.8 -0.1 -70 0.2 NCOA3 PKNOX1 ESRRA NFIB NEUROD1 ZBTB7B E2F1 ZFHX2 GATA3 CTBP1 MIR6775 ENSG00000260466 SLC7A5
GH16I087836 Enhancer 1 ENCODE dbSUPER 550.8 -0.5 -459 0.6 NCOA3 PKNOX1 ESRRA NFIB NEUROD1 EBF1 ZBTB7B HIC1 E2F1 ZFHX2 ENSG00000260466 MIR6775 SLC7A5
GH16I087833 Enhancer 0.6 ENCODE dbSUPER 550.8 +1.5 1450 0.2 SCRT1 POLR2A SPI1 MIR6775 ENSG00000260177 SLC7A5
GH16I087832 Enhancer 0.5 ENCODE dbSUPER 550.8 +1.6 1610 0.2 POLR2A MIR6775 ENSG00000260177 SLC7A5
GH16I087805 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +26.2 26233 5.5 PKNOX1 ARID4B NEUROD1 SIN3A DMAP1 IRF4 POLR2B ZNF766 E2F8 ZNF143 ENSG00000260177 SLC7A5 LOC101928659 CTU2 ZCCHC14 RNF166 MIR6775
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR6775 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR6775 Gene

Genomic Locations for MIR6775 Gene
chr16:87,834,592-87,834,660
(GRCh38/hg38)
Size:
69 bases
Orientation:
Minus strand

Genomic View for MIR6775 Gene

Genes around MIR6775 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR6775 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR6775 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR6775 Gene

ORGUL Member Location for MIR6775 Gene

ORGUL Member Location for MIR6775 gene

Proteins for MIR6775 Gene

Post-translational modifications for MIR6775 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR6775 Gene

Domains & Families for MIR6775 Gene

Gene Families for MIR6775 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR6775: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR6775 Gene

Function for MIR6775 Gene

Phenotypes From GWAS Catalog for MIR6775 Gene

Animal Model Products

miRNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR6775 Gene

Localization for MIR6775 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR6775 Gene

Pathways & Interactions for MIR6775 Gene

SuperPathways for MIR6775 Gene

No Data Available

Interacting Proteins for MIR6775 Gene

Gene Ontology (GO) - Biological Process for MIR6775 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR6775 Gene

Drugs & Compounds for MIR6775 Gene

No Compound Related Data Available

Transcripts for MIR6775 Gene

mRNA/cDNA for MIR6775 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR6775 Gene

No ASD Table

Relevant External Links for MIR6775 Gene

GeneLoc Exon Structure for
MIR6775
ECgene alternative splicing isoforms for
MIR6775

Expression for MIR6775 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR6775 Gene:

MIR6775
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR6775 Gene

Orthologs for MIR6775 Gene

Evolution for MIR6775 Gene

ENSEMBL:
Gene Tree for MIR6775 (if available)
TreeFam:
Gene Tree for MIR6775 (if available)

No data available for Orthologs for MIR6775 Gene

Paralogs for MIR6775 Gene

No data available for Paralogs for MIR6775 Gene

Variants for MIR6775 Gene

Sequence variations from dbSNP and Humsavar for MIR6775 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000982650 -- 87,834,708(-) C/A/T upstream_transcript_variant
rs1001072684 -- 87,834,844(-) C/G/T upstream_transcript_variant
rs1001860304 -- 87,835,021(-) C/T upstream_transcript_variant
rs1002038632 -- 87,834,873(-) G/A/C upstream_transcript_variant
rs1002524583 -- 87,836,279(-) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR6775 Gene

Variant ID Type Subtype PubMed ID
dgv3062n100 CNV loss 25217958
dgv36n68 CNV loss 17160897
esv3892935 CNV loss 25118596
nsv1059786 CNV gain 25217958
nsv1062946 CNV gain 25217958
nsv1160441 CNV deletion 26073780
nsv457616 CNV gain 19166990
nsv573536 CNV gain 21841781
nsv573557 CNV loss 21841781
nsv833322 CNV loss 17160897

Additional Variant Information for MIR6775 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR6775

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR6775 Gene

Disorders for MIR6775 Gene

Additional Disease Information for MIR6775

No disorders were found for MIR6775 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR6775 Gene

Publications for MIR6775 Gene

  1. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58
  3. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3

Products for MIR6775 Gene

Sources for MIR6775 Gene

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