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Aliases for MIR670 Gene

Subcategory (RNA class) for MIR670 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR670 Gene

  • MicroRNA 670 2 3 5
  • Hsa-Mir-670 3

External Ids for MIR670 Gene

Previous GeneCards Identifiers for MIR670 Gene

  • GC00U928193
  • GC11P043583
  • GC11P043291
  • GC11P043584
  • GC11P043585
  • GC11P043564
  • GC11P043565
  • GC11P043567
  • GC11P043570
  • GC11P043573
  • GC11P043576
  • GC11P043589

Summaries for MIR670 Gene

Entrez Gene Summary for MIR670 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR670 Gene

MIR670 (MicroRNA 670) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR670 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR670 Gene

Genomics for MIR670 Gene

GeneHancer (GH) Regulatory Elements for MIR670 Gene

Promoters and enhancers for MIR670 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I043557 Enhancer 0.5 ENCODE 550.8 -1.7 -1710 0.2 USF1 ATF1 EGR1 SCRT2 NR2C1 SIN3A NR2C2 ENSG00000283217 GC11P043608 MIR670 LOC101928704
GH11I043559 Enhancer 0.5 ENCODE 550.8 -2.0 -1957 0.1 CTCF EGR1 SCRT2 NR2C1 SIN3A RAD21 NR2C2 GC11P043608 MIR670 LOC101928704 ENSG00000283217
GH11I043558 Enhancer 0.4 ENCODE 550.8 -1.5 -1450 0.2 SCRT2 NR2C2 ENSG00000283217 GC11P043608 LOC101928704 MIR670
GH11I043817 Enhancer 0.5 ENCODE 10.4 +259.2 259216 2.6 PKNOX1 HMBOX1 MLLT1 NFE2 BATF HSD17B12 LOC105376644 ALKBH3 MIR670 MIR670HG MIR129-2 ENSG00000283375 PIR48162 ENSG00000283341
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR670 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR670 Gene

Genomic Locations for MIR670 Gene
chr11:43,559,656-43,559,753
(GRCh38/hg38)
Size:
98 bases
Orientation:
Plus strand
chr11:43,581,206-43,581,303
(GRCh37/hg19)

Genomic View for MIR670 Gene

Genes around MIR670 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR670 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR670 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR670 Gene

Proteins for MIR670 Gene

Post-translational modifications for MIR670 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR670 Gene

Domains & Families for MIR670 Gene

Gene Families for MIR670 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR670: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR670 Gene

Function for MIR670 Gene

Phenotypes From GWAS Catalog for MIR670 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR670 Gene

Localization for MIR670 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR670 Gene

Pathways & Interactions for MIR670 Gene

SuperPathways for MIR670 Gene

No Data Available

Interacting Proteins for MIR670 Gene

Gene Ontology (GO) - Biological Process for MIR670 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR670 Gene

Drugs & Compounds for MIR670 Gene

No Compound Related Data Available

Transcripts for MIR670 Gene

mRNA/cDNA for MIR670 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR670 Gene

No ASD Table

Relevant External Links for MIR670 Gene

GeneLoc Exon Structure for
MIR670
ECgene alternative splicing isoforms for
MIR670

Expression for MIR670 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR670 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR670 Gene:

MIR670
genes like me logo Genes that share expression patterns with MIR670: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR670 Gene

Orthologs for MIR670 Gene

Evolution for MIR670 Gene

ENSEMBL:
Gene Tree for MIR670 (if available)
TreeFam:
Gene Tree for MIR670 (if available)

No data available for Orthologs for MIR670 Gene

Paralogs for MIR670 Gene

No data available for Paralogs for MIR670 Gene

Variants for MIR670 Gene

Sequence variations from dbSNP and Humsavar for MIR670 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1001368056 -- 43,557,985(+) C/T upstream_transcript_variant
rs1001919215 -- 43,559,384(+) T/A upstream_transcript_variant
rs1005552689 -- 43,557,760(+) A/T upstream_transcript_variant
rs1006139613 -- 43,558,924(+) A/G upstream_transcript_variant
rs1009657988 -- 43,558,481(+) T/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR670 Gene

Variant ID Type Subtype PubMed ID
dgv66n21 CNV loss 19592680

Additional Variant Information for MIR670 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR670

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR670 Gene

Disorders for MIR670 Gene

Additional Disease Information for MIR670

No disorders were found for MIR670 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR670 Gene

Publications for MIR670 Gene

  1. Distinct miRNA signatures associate with subtypes of cholangiocarcinoma from infection with the tumourigenic liver fluke Opisthorchis viverrini. (PMID: 25017828) Plieskatt JL … Bethony JM (Journal of hepatology 2014) 3 58
  2. Birth and expression evolution of mammalian microRNA genes. (PMID: 23034410) Meunier J … Kaessmann H (Genome research 2013) 3 58
  3. miRNAminer: a tool for homologous microRNA gene search. (PMID: 18215311) Artzi S … Shomron N (BMC bioinformatics 2008) 3 58
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58
  5. Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis. (PMID: 16954537) Berezikov E … Cuppen E (Genome research 2006) 3 58

Products for MIR670 Gene

Sources for MIR670 Gene

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