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Aliases for MIR662 Gene

Subcategory (RNA class) for MIR662 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR662 Gene

  • MicroRNA 662 2 3
  • Hsa-Mir-662 3
  • MIRN662 3

External Ids for MIR662 Gene

ORGUL Members for MIR662 Gene

Previous HGNC Symbols for MIR662 Gene

  • MIRN662

Previous GeneCards Identifiers for MIR662 Gene

  • GC16P000761
  • GC16P000820

Summaries for MIR662 Gene

Entrez Gene Summary for MIR662 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR662 Gene

MIR662 (MicroRNA 662) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR662 Gene

Genomics for MIR662 Gene

Genomic Location for MIR662 Gene

Start:
770,183 bp from pter
End:
770,277 bp from pter
Size:
95 bases
Orientation:
Plus strand

Genomic View for MIR662 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR662 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR662 Gene

No data available for Regulatory Elements for MIR662 Gene

Proteins for MIR662 Gene

Post-translational modifications for MIR662 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR662 Gene

Domains for MIR662 Gene

Gene Families for MIR662 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR662: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR662 Gene

Function for MIR662 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR662 Gene

Localization for MIR662 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR662 Gene

Pathways for MIR662 Gene

SuperPathways for MIR662 Gene

No Data Available

Interacting Proteins for MIR662 Gene

Gene Ontology (GO) - Biological Process for MIR662 Gene

None

No data available for Pathways by source for MIR662 Gene

Transcripts for MIR662 Gene

mRNA/cDNA for MIR662 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR662 Gene

No ASD Table

Relevant External Links for MIR662 Gene

GeneLoc Exon Structure for
MIR662
ECgene alternative splicing isoforms for
MIR662

Expression for MIR662 Gene

mRNA expression in normal human tissues for MIR662 Gene

genes like me logo Genes that share expressions with MIR662: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR662 Gene

Orthologs for MIR662 Gene

This gene was present in the common ancestor of mammals.

Orthologs for MIR662 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia -- 36
  • 83 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm25083 36
  • 72 (a)
OneToOne
Species with no ortholog for MIR662:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR662 Gene

ENSEMBL:
Gene Tree for MIR662 (if available)
TreeFam:
Gene Tree for MIR662 (if available)

Paralogs for MIR662 Gene

No data available for Paralogs for MIR662 Gene

Variants for MIR662 Gene

Sequence variations from dbSNP and Humsavar for MIR662 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs3765326 -- 769,674(+) CCAGA(C/T)GCTAC upstream-variant-2KB
rs3765327 -- 769,719(+) GGCAG(C/T)CCCTC upstream-variant-2KB
rs3765328 -- 770,328(+) GGCCA(A/C)CTTCT downstream-variant-500B
rs5029234 -- 770,662(+) CACCA(G/T)GGGAG downstream-variant-500B
rs7185231 -- 770,109(+) TGGGG(A/G)GCCCC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR662 Gene

Variant ID Type Subtype PubMed ID
esv2422427 CNV Duplication 17116639
nsv526903 CNV Loss 19592680
dgv2475n71 CNV Loss 21882294
nsv471063 CNV Loss 18288195
dgv2485n71 CNV Loss 21882294
nsv9321 CNV Gain+Loss 18304495
nsv904796 CNV Loss 21882294
nsv904797 CNV Loss 21882294
nsv1702 CNV Insertion 18451855
dgv2498n71 CNV Loss 21882294
dgv2499n71 CNV Loss 21882294
dgv2500n71 CNV Loss 21882294
nsv457312 CNV Loss 19166990
nsv517488 CNV Loss 19592680

Relevant External Links for MIR662 Gene

HapMap Linkage Disequilibrium report
MIR662

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for MIR662 Gene

Disorders for MIR662 Gene

No disorders were found for MIR662 Gene.

No data available for UniProtKB/Swiss-Prot for MIR662 Gene

Publications for MIR662 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. The colorectal microRNAome. (PMID: 16505370) Cummins J.M. … Velculescu V.E. (Proc. Natl. Acad. Sci. U.S.A. 2006) 3

Products for MIR662 Gene

Sources for MIR662 Gene

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