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Aliases for MIR656 Gene

Subcategory (RNA class) for MIR656 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR656 Gene

  • MicroRNA 656 2 3
  • Hsa-Mir-656 3
  • MIRN656 3

External Ids for MIR656 Gene

ORGUL Members for MIR656 Gene

Previous Symbols for MIR656 Gene

  • MIRN656

Summaries for MIR656 Gene

Entrez Gene Summary for MIR656 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR656 Gene

MIR656 (MicroRNA 656) is a RNA Gene, and belongs to miRNA RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR656 Gene

Genomics for MIR656 Gene

Genomic Location for MIR656 Gene

Start:
101,066,724 bp from pter
End:
101,066,801 bp from pter
Size:
78 bases
Orientation:
Plus strand

Genomic View for MIR656 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR656 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR656 Gene

No data available for Regulatory Elements for MIR656 Gene

Proteins for MIR656 Gene

Post-translational modifications for MIR656 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR656 Gene

Domains for MIR656 Gene

Gene Families for MIR656 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs
genes like me logo Genes that share domains with MIR656: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for MIR656 Gene

Function for MIR656 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR656 Gene

Localization for MIR656 Gene

No data available for Gene Ontology (GO) - Cellular Components for MIR656 Gene

Pathways for MIR656 Gene

SuperPathways for MIR656 Gene

No Data Available

Interacting Proteins for MIR656 Gene

Gene Ontology (GO) - Biological Process for MIR656 Gene

None

No data available for Pathways by source for MIR656 Gene

Transcripts for MIR656 Gene

mRNA/cDNA for MIR656 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR656 Gene

No ASD Table

Relevant External Links for MIR656 Gene

GeneLoc Exon Structure for
MIR656
ECgene alternative splicing isoforms for
MIR656

Expression for MIR656 Gene

mRNA expression in normal human tissues for MIR656 Gene

genes like me logo Genes that share expressions with MIR656: view

Orthologs for MIR656 Gene

This gene was present in the common ancestor of mammals.

Orthologs for MIR656 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-656 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia bta-mir-656 37
  • 95 (a)
OneToOne
dog
(Canis familiaris)
Mammalia -- 37
  • 95 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mir382 37
  • 50 (a)
ManyToMany
Species with no ortholog for MIR656:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR656 Gene

ENSEMBL:
Gene Tree for MIR656 (if available)
TreeFam:
Gene Tree for MIR656 (if available)

Paralogs for MIR656 Gene

No data available for Paralogs for MIR656 Gene

Variants for MIR656 Gene

Sequence variations from dbSNP and Humsavar for MIR656 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs8015875 -- 101,066,951(+) GTGAC(A/G)GAATG downstream-variant-500B
rs8016145 -- 101,066,883(+) GTGTA(A/G)GACCT downstream-variant-500B
rs8016185 -- 101,067,047(+) CTACC(C/T)GATGC downstream-variant-500B
rs8016248 -- 101,067,209(+) CAAAG(A/C)ATGAG downstream-variant-500B
rs58834075 -- 101,066,756(+) ACTTT(C/T)TATAT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for MIR656 Gene

Variant ID Type Subtype PubMed ID
nsv509551 CNV Insertion 20534489

Relevant External Links for MIR656 Gene

HapMap Linkage Disequilibrium report
MIR656
Human Gene Mutation Database (HGMD)
MIR656

Disorders for MIR656 Gene

No disorders were found for MIR656 Gene.

No data available for UniProtKB/Swiss-Prot for MIR656 Gene

Publications for MIR656 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. The colorectal microRNAome. (PMID: 16505370) Cummins J.M. … Velculescu V.E. (Proc. Natl. Acad. Sci. U.S.A. 2006) 3
  3. A genome-wide search for loci interacting with known prostate cancer risk-associated genetic variants. (PMID: 22219177) Tao S. … Sun J. (Carcinogenesis 2012) 3
  4. Birth and expression evolution of mammalian microRNA genes. (PMID: 23034410) Meunier J. … Kaessmann H. (Genome Res. 2013) 3
  5. miR-656 inhibits glioma tumorigenesis through repression of BMPR1A. (PMID: 24480809) Guo M. … Lin Z. (Carcinogenesis 2014) 3

Products for MIR656 Gene

Sources for MIR656 Gene

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