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Aliases for MIR639 Gene

Subcategory (RNA class) for MIR639 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR639 Gene

  • MicroRNA 639 2 3
  • Hsa-Mir-639 3
  • MIRN639 3

External Ids for MIR639 Gene

ORGUL Members for MIR639 Gene

Previous HGNC Symbols for MIR639 Gene

  • MIRN639

Previous GeneCards Identifiers for MIR639 Gene

  • GC19P014503
  • GC19P014640

Summaries for MIR639 Gene

Entrez Gene Summary for MIR639 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR639 Gene

MIR639 (MicroRNA 639) is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for MIR639 Gene

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR639 Gene

Genomics for MIR639 Gene

Genomic Location for MIR639 Gene

Start:
14,529,543 bp from pter
End:
14,529,640 bp from pter
Size:
98 bases
Orientation:
Plus strand

Genomic View for MIR639 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR639 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR639 Gene

ORGUL Member Location for MIR639 Gene

ORGUL Member Location for MIR639 gene

No data available for Regulatory Elements for MIR639 Gene

Proteins for MIR639 Gene

Post-translational modifications for MIR639 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR639 Gene

Domains for MIR639 Gene

Gene Families for MIR639 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR639: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR639 Gene

Function for MIR639 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR639 Gene

Localization for MIR639 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR639 Gene

Pathways for MIR639 Gene

SuperPathways for MIR639 Gene

No Data Available

Interacting Proteins for MIR639 Gene

Gene Ontology (GO) - Biological Process for MIR639 Gene

None

No data available for Pathways by source for MIR639 Gene

Transcripts for MIR639 Gene

mRNA/cDNA for MIR639 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR639 Gene

No ASD Table

Relevant External Links for MIR639 Gene

GeneLoc Exon Structure for
MIR639
ECgene alternative splicing isoforms for
MIR639

Expression for MIR639 Gene

mRNA expression in normal human tissues for MIR639 Gene

genes like me logo Genes that share expressions with MIR639: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR639 Gene

Orthologs for MIR639 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR639 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 96 (a)
OneToOne
Species with no ortholog for MIR639:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR639 Gene

ENSEMBL:
Gene Tree for MIR639 (if available)
TreeFam:
Gene Tree for MIR639 (if available)

Paralogs for MIR639 Gene

No data available for Paralogs for MIR639 Gene

Variants for MIR639 Gene

Relevant External Links for MIR639 Gene

HapMap Linkage Disequilibrium report
MIR639

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for MIR639 Gene

Disorders for MIR639 Gene

No disorders were found for MIR639 Gene.

No data available for UniProtKB/Swiss-Prot for MIR639 Gene

Publications for MIR639 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. The colorectal microRNAome. (PMID: 16505370) Cummins J.M. … Velculescu V.E. (Proc. Natl. Acad. Sci. U.S.A. 2006) 3
  3. miR-639 regulates transforming growth factor beta-induced epithelial-mesenchymal transition in human tongue cancer cells by targeting FOXC1. (PMID: 25130698) Lin Z. … Li J. (Cancer Sci. 2014) 3

Products for MIR639 Gene

Sources for MIR639 Gene

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