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Aliases for MIR636 Gene

Subcategory (RNA class) for MIR636 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR636 Gene

  • MicroRNA 636 2 3 5
  • Hsa-Mir-636 3
  • MIRN636 3

External Ids for MIR636 Gene

Previous HGNC Symbols for MIR636 Gene

  • MIRN636

Previous GeneCards Identifiers for MIR636 Gene

  • GC17M072245
  • GC17M074732
  • GC17M076737
  • GC17M076738

Summaries for MIR636 Gene

Entrez Gene Summary for MIR636 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR636 Gene

MIR636 (MicroRNA 636) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are Formation of HIV elongation complex in the absence of HIV Tat and RNA Polymerase II Transcription Termination.

fRNAdb sequence ontologies for MIR636 Gene

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

View fRNAdb secondary structures for MIR636

Additional gene information for MIR636 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR636 Gene

Genomics for MIR636 Gene

Regulatory Elements for MIR636 Gene

Enhancers for MIR636 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H076772 0.9 Ensembl ENCODE 11.7 -36.5 -36501 1 SP3 KLF1 SP2 KLF17 ZNF664 ZFP69B JUND POLR2A RCOR1 MLLT1 MFSD11 MIR636 SRSF2 METTL23 JMJD6 UBALD2 GC17P076792 RNU6-97P
GH17H076734 2.7 Ensembl ENCODE dbSUPER 0.7 -0.7 -711 7 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 SP3 NFYC ZC3H11A UNK SRSF2 ENSG00000267342 TRIM65 ENSG00000266980 ENSG00000267546 SEPT9 CDK3 METTL23 MFSD11
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR636 on UCSC Golden Path with GeneCards custom track

Promoters for MIR636 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000098628 -552 3801 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 SP3 NFYC ZC3H11A

Genomic Location for MIR636 Gene

Chromosome:
17
Start:
76,736,450 bp from pter
End:
76,736,548 bp from pter
Size:
99 bases
Orientation:
Minus strand

Genomic View for MIR636 Gene

Genes around MIR636 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR636 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR636 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR636 Gene

ORGUL Member Location for MIR636 Gene

ORGUL Member Location for MIR636 gene

Proteins for MIR636 Gene

Post-translational modifications for MIR636 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR636 Gene

Domains & Families for MIR636 Gene

Gene Families for MIR636 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR636: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR636 Gene

Function for MIR636 Gene

Phenotypes From GWAS Catalog for MIR636 Gene

Animal Model Products

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR636
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR636 Gene

Localization for MIR636 Gene

Gene Ontology (GO) - Cellular Components for MIR636 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005615 extracellular space IDA 26646931
genes like me logo Genes that share ontologies with MIR636: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for MIR636 Gene

Drugs & Compounds for MIR636 Gene

No Compound Related Data Available

Transcripts for MIR636 Gene

fRNAdb Secondary structures for MIR636 Gene

  • FR272384

mRNA/cDNA for MIR636 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR636
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MIR636 Gene

No ASD Table

Relevant External Links for MIR636 Gene

GeneLoc Exon Structure for
MIR636
ECgene alternative splicing isoforms for
MIR636

Expression for MIR636 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR636 Gene

mRNA differential expression in normal tissues according to GTEx for MIR636 Gene

This gene is overexpressed in Testis (x6.5).

NURSA nuclear receptor signaling pathways regulating expression of MIR636 Gene:

MIR636
genes like me logo Genes that share expression patterns with MIR636: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR636 Gene

Orthologs for MIR636 Gene

Evolution for MIR636 Gene

ENSEMBL:
Gene Tree for MIR636 (if available)
TreeFam:
Gene Tree for MIR636 (if available)

No data available for Orthologs for MIR636 Gene

Paralogs for MIR636 Gene

No data available for Paralogs for MIR636 Gene

Variants for MIR636 Gene

Sequence variations from dbSNP and Humsavar for MIR636 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1000409899 -- 76,736,096(+) AAAGA(C/G)CTACC intron-variant, downstream-variant-500B, upstream-variant-2KB, utr-variant-3-prime
rs1000715601 -- 76,736,918(+) CGGCC(A/G)TCCAG nc-transcript-variant, upstream-variant-2KB, reference, synonymous-codon, utr-variant-5-prime
rs1002118252 -- 76,737,983(+) TGACC(C/T)GGTCG intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1003296233 -- 76,737,522(+) CGGCT(-/GGAG)GGAGG intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1003754996 -- 76,737,446(+) GACCC(C/G/T)GCCGC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR636 Gene

Variant ID Type Subtype PubMed ID
nsv1110921 OTHER inversion 24896259
nsv833550 CNV loss 17160897

Relevant External Links for MIR636 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR636

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR636 Gene

Disorders for MIR636 Gene

Relevant External Links for MIR636

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR636

No disorders were found for MIR636 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR636 Gene

Publications for MIR636 Gene

  1. The colorectal microRNAome. (PMID: 16505370) Cummins JM … Velculescu VE (Proceedings of the National Academy of Sciences of the United States of America 2006) 1 3 60
  2. Association of MicroRNAs and YRNAs With Platelet Function. (PMID: 26646931) Kaudewitz D … Mayr M (Circulation research 2016) 3 60
  3. ANT2 suppression by shRNA restores miR-636 expression, thereby downregulating Ras and inhibiting tumorigenesis of hepatocellular carcinoma. (PMID: 23306701) Jang JY … Kim CW (Experimental & molecular medicine 2013) 3 60
  4. Genetic loci for retinal arteriolar microcirculation. (PMID: 23776548) Sim X … Wong TY (PloS one 2013) 3 60
  5. A mammalian microRNA expression atlas based on small RNA library sequencing. (PMID: 17604727) Landgraf P … Tuschl T (Cell 2007) 3 60

Products for MIR636 Gene

Sources for MIR636 Gene

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