Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR623 Gene

Subcategory (RNA class) for MIR623 Gene


Quality Score for this RNA gene is


Aliases for MIR623 Gene

  • MicroRNA 623 2 3 5
  • Hsa-Mir-623 3
  • MIRN623 3

External Ids for MIR623 Gene

ORGUL Members for MIR623 Gene

Previous HGNC Symbols for MIR623 Gene

  • MIRN623

Previous GeneCards Identifiers for MIR623 Gene

  • GC13P098807
  • GC13P100008

Summaries for MIR623 Gene

Entrez Gene Summary for MIR623 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR623 Gene

MIR623 (MicroRNA 623) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR623 Gene

Genomics for MIR623 Gene

Regulatory Elements for MIR623 Gene

Enhancers for MIR623 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F099332 0.6 Ensembl 12.8 -23.7 -23731 0.8 ZNF2 THRB ZNF121 GLIS2 CREM ZNF263 CBFB ZEB2 TBX21 GLIS1 GPR18 MIR623 GPR183 UBAC2 GC13M099261 GC13M099346
GH13F099378 1.2 FANTOM5 Ensembl ENCODE 12.6 +25.6 25612 6.3 HDGF PKNOX1 WRNIP1 ZNF121 ETV6 CREM ZNF202 JUNB TBX21 ZNF781 UBAC2 GPR18 GPR183 MIR623 STK24-AS1 DOCK9 CLYBL GC13P099385 HMGB3P4
GH13F099324 0.2 ENCODE 12.4 -31.0 -30987 2.2 TBP ATF1 PKNOX1 TBL1XR1 FEZF1 SCRT2 ZNF202 CBFB JUNB ZNF488 MIR623 STK24-AS1 GPR18 UBAC2 GC13M099261 GC13M099346
GH13F099319 1.6 FANTOM5 Ensembl ENCODE 12.3 -34.4 -34392 4.5 PKNOX1 FEZF1 ZNF2 KLF7 FOS ZNF202 JUNB TBX21 ZNF264 CBX8 TM9SF2 MIR623 STK24-AS1 GPR18 HMGB3P4 UBAC2 GPR183 GC13M099261
GH13F099317 0.4 ENCODE 12.2 -38.1 -38093 0.1 HDAC1 ATF1 CREB3L1 SIN3A GLI4 ZNF2 SCRT2 CREM EGR2 ZNF263 LINC00554 RN7SKP9 LINC01039 CFL1P8 MIR623 GC13M099261 GPR183
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR623 on UCSC Golden Path with GeneCards custom track

Promoters for MIR623 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for MIR623 Gene

99,356,131 bp from pter
99,356,228 bp from pter
98 bases
Plus strand

Genomic View for MIR623 Gene

Genes around MIR623 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR623 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR623 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR623 Gene

Proteins for MIR623 Gene

Post-translational modifications for MIR623 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR623 Gene

Domains & Families for MIR623 Gene

Gene Families for MIR623 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR623: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR623 Gene

Function for MIR623 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR623 Gene

Localization for MIR623 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR623 Gene

Pathways & Interactions for MIR623 Gene

SuperPathways for MIR623 Gene

No Data Available

Interacting Proteins for MIR623 Gene

Gene Ontology (GO) - Biological Process for MIR623 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR623 Gene

Transcripts for MIR623 Gene

mRNA/cDNA for MIR623 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR623 Gene

No ASD Table

Relevant External Links for MIR623 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR623 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR623 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR623 Gene:

genes like me logo Genes that share expression patterns with MIR623: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR623 Gene

Orthologs for MIR623 Gene

Evolution for MIR623 Gene

Gene Tree for MIR623 (if available)
Gene Tree for MIR623 (if available)

No data available for Orthologs for MIR623 Gene

Paralogs for MIR623 Gene

No data available for Paralogs for MIR623 Gene

Variants for MIR623 Gene

Sequence variations from dbSNP and Humsavar for MIR623 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs114355128 -- 99,356,704(+) AGCAC(A/G)ACACA intron-variant, downstream-variant-500B
rs115823114 -- 99,354,236(+) CATGA(A/G)CAGTG intron-variant, upstream-variant-2KB
rs115896962 -- 99,355,008(+) TGAAC(A/G)CAGAT intron-variant, upstream-variant-2KB
rs116482066 -- 99,354,991(+) ACATC(C/T)GCCTG intron-variant, upstream-variant-2KB
rs116760906 -- 99,356,076(+) GGCCT(C/T)TGAAA intron-variant, upstream-variant-2KB

Relevant External Links for MIR623 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR623 Gene

Disorders for MIR623 Gene

Relevant External Links for MIR623

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR623 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR623 Gene

Publications for MIR623 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64
  2. The colorectal microRNAome. (PMID: 16505370) Cummins J.M. … Velculescu V.E. (Proc. Natl. Acad. Sci. U.S.A. 2006) 3 64

Products for MIR623 Gene

Sources for MIR623 Gene

Loading form....