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Aliases for MIR617 Gene

Subcategory (RNA class) for MIR617 Gene


Quality Score for this RNA gene is


Aliases for MIR617 Gene

  • MicroRNA 617 2 3 5
  • Hsa-Mir-617 3
  • MIRN617 3

External Ids for MIR617 Gene

Previous HGNC Symbols for MIR617 Gene

  • MIRN617

Previous GeneCards Identifiers for MIR617 Gene

  • GC12M079751
  • GC12M081226

Summaries for MIR617 Gene

Entrez Gene Summary for MIR617 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR617 Gene

MIR617 (MicroRNA 617) is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for MIR617 Gene - the ORGUL cluster for this gene includes several descriptions:

  • miRNA: Small, ~22-nt, RNA molecule that is the endogenous transcript of a miRNA gene. Micro RNAs are produced from precursor molecules (SO:0000647) that can form local hairpin structures, which ordinarily are processed (via the Dicer pathway) such that a single miRNA molecule accumulates from one arm of a hairpin precursor molecule. Micro RNAs may trigger the cleavage of their target molecules or act as translational repressors.

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

View fRNAdb secondary structures for MIR617

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR617 Gene

Genomics for MIR617 Gene

Regulatory Elements for MIR617 Gene

Enhancers for MIR617 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F080837 0.5 ENCODE 0.8 -4.9 -4908 0.2 CTCF PKNOX1 RFX1 TEAD4 RAD21 TEAD3 GATA3 KLF16 SMC3 MIR617 GC12P080845
GH12F080838 0.2 ENCODE 0.4 -5.6 -5648 0.2 GATA3 GC12P080845 MIR617
GH12F080839 0.6 Ensembl 0.4 -6.3 -6272 0.2 GC12P080845 MIR617
GH12F080821 0.4 ENCODE 0.4 +10.8 10766 0.7 SMARCA4 POLR2A PRDM10 ZNF7 MIR617 GC12M080765
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR617 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR617 Gene

80,832,533 bp from pter
80,832,629 bp from pter
97 bases
Minus strand

Genomic View for MIR617 Gene

Genes around MIR617 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR617 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR617 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR617 Gene

ORGUL Member Location for MIR617 Gene

ORGUL Member Location for MIR617 gene

Proteins for MIR617 Gene

Post-translational modifications for MIR617 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR617 Gene

Domains & Families for MIR617 Gene

Gene Families for MIR617 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR617: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR617 Gene

Function for MIR617 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR617 Gene

Localization for MIR617 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR617 Gene

Pathways & Interactions for MIR617 Gene

SuperPathways for MIR617 Gene

No Data Available

Interacting Proteins for MIR617 Gene

Gene Ontology (GO) - Biological Process for MIR617 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR617 Gene

Transcripts for MIR617 Gene

fRNAdb Secondary structures for MIR617 Gene

  • FR117298
  • hsa-miR-617_MIMAT0003286_Homo_sapiens_miR-617_mature

mRNA/cDNA for MIR617 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR617 Gene

No ASD Table

Relevant External Links for MIR617 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR617 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR617 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR617 Gene:

genes like me logo Genes that share expression patterns with MIR617: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR617 Gene

Orthologs for MIR617 Gene

Evolution for MIR617 Gene

Gene Tree for MIR617 (if available)
Gene Tree for MIR617 (if available)

No data available for Orthologs for MIR617 Gene

Paralogs for MIR617 Gene

No data available for Paralogs for MIR617 Gene

Variants for MIR617 Gene

Sequence variations from dbSNP and Humsavar for MIR617 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs10506837 -- 80,833,091(+) TACTT(C/T)GAAAT intron-variant, upstream-variant-2KB
rs10862195 -- 80,834,505(+) ATCTA(C/T)GAGAG intron-variant, upstream-variant-2KB
rs11114631 -- 80,833,427(+) GTTAA(A/G)ACCTC intron-variant, upstream-variant-2KB
rs112173639 -- 80,833,021(+) AAGGG(C/T)GAGAA intron-variant, upstream-variant-2KB
rs113298105 -- 80,832,131(+) ATATT(A/G)GCACA intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for MIR617 Gene

Variant ID Type Subtype PubMed ID
nsv559464 CNV loss 21841781

Relevant External Links for MIR617 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR617 Gene

Disorders for MIR617 Gene

Relevant External Links for MIR617

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR617 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR617 Gene

Publications for MIR617 Gene

  1. The colorectal microRNAome. (PMID: 16505370) Cummins J.M. … Velculescu V.E. (Proc. Natl. Acad. Sci. U.S.A. 2006) 1 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR617 Gene

Sources for MIR617 Gene

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