Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR607 Gene

Subcategory (RNA class) for MIR607 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR607 Gene

  • MicroRNA 607 2 3
  • Hsa-Mir-607 3
  • MIRN607 3

External Ids for MIR607 Gene

Previous HGNC Symbols for MIR607 Gene

  • MIRN607

Previous GeneCards Identifiers for MIR607 Gene

  • GC10M098579

Summaries for MIR607 Gene

Entrez Gene Summary for MIR607 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR607 Gene

MIR607 (MicroRNA 607) is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for MIR607 Gene

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

View fRNAdb secondary structures for MIR607

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR607 Gene

Genomics for MIR607 Gene

Genomic Location for MIR607 Gene

Start:
96,828,669 bp from pter
End:
96,828,764 bp from pter
Size:
96 bases
Orientation:
Minus strand

Genomic View for MIR607 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR607 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR607 Gene

ORGUL Member Location for MIR607 Gene

ORGUL Member Location for MIR607 gene

No data available for Regulatory Elements for MIR607 Gene

Proteins for MIR607 Gene

Post-translational modifications for MIR607 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR607 Gene

Domains for MIR607 Gene

Gene Families for MIR607 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR607: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR607 Gene

Function for MIR607 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR607 Gene

Localization for MIR607 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR607 Gene

Pathways for MIR607 Gene

SuperPathways for MIR607 Gene

No Data Available

Interacting Proteins for MIR607 Gene

Gene Ontology (GO) - Biological Process for MIR607 Gene

None

No data available for Pathways by source for MIR607 Gene

Transcripts for MIR607 Gene

fRNAdb Secondary structures for MIR607 Gene

  • FR380951

mRNA/cDNA for MIR607 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR607 Gene

No ASD Table

Relevant External Links for MIR607 Gene

GeneLoc Exon Structure for
MIR607
ECgene alternative splicing isoforms for
MIR607

Expression for MIR607 Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR607 Gene

Orthologs for MIR607 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR607 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 99 (a)
OneToOne
Species with no ortholog for MIR607:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR607 Gene

ENSEMBL:
Gene Tree for MIR607 (if available)
TreeFam:
Gene Tree for MIR607 (if available)

Paralogs for MIR607 Gene

No data available for Paralogs for MIR607 Gene

Variants for MIR607 Gene

Sequence variations from dbSNP and Humsavar for MIR607 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs6584103 -- 96,829,973(+) CCCAC(C/T)TCAGC upstream-variant-2KB
rs12244490 -- 96,828,466(+) CACCA(C/T)GCCCG downstream-variant-500B
rs12778876 -- 96,828,738(+) tccag(A/T)tctat nc-transcript-variant
rs12780546 -- 96,828,739(+) ccaga(A/T)ctata nc-transcript-variant
rs72819819 -- 96,828,539(+) AAGCC(G/T)TGTGA downstream-variant-500B

Relevant External Links for MIR607 Gene

HapMap Linkage Disequilibrium report
MIR607

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for MIR607 Gene

Disorders for MIR607 Gene

No disorders were found for MIR607 Gene.

No data available for UniProtKB/Swiss-Prot for MIR607 Gene

Publications for MIR607 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. The colorectal microRNAome. (PMID: 16505370) Cummins J.M. … Velculescu V.E. (Proc. Natl. Acad. Sci. U.S.A. 2006) 3

Products for MIR607 Gene

Sources for MIR607 Gene

Back to Top

Content