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Aliases for MIR606 Gene

Subcategory (RNA class) for MIR606 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR606 Gene

  • MicroRNA 606 2 3 5
  • Hsa-Mir-606 3
  • MIRN606 3

External Ids for MIR606 Gene

ORGUL Members for MIR606 Gene

Previous HGNC Symbols for MIR606 Gene

  • MIRN606

Previous GeneCards Identifiers for MIR606 Gene

  • GC10P076983
  • GC10P077312

Summaries for MIR606 Gene

Entrez Gene Summary for MIR606 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR606 Gene

MIR606 (MicroRNA 606) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR606 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR606 Gene

Genomics for MIR606 Gene

GeneHancer (GH) Regulatory Elements for MIR606 Gene

Promoters and enhancers for MIR606 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I075612 Enhancer 1.6 UCNEbase Ensembl ENCODE 10.9 +61.4 61425 2.2 PKNOX1 ARNT FEZF1 ZNF2 ZNF121 ZNF213 ZNF302 KLF7 RUNX3 ZNF488 LRMDA MIR606 ENSG00000236842 ZNF503 ZNF503-AS2 GC10M075584 GC10P075624
GH10I075771 Enhancer 1.4 FANTOM5 Ensembl ENCODE 10.3 +220.4 220449 2.6 PKNOX1 FOXA2 SIN3A FEZF1 DMAP1 ZNF48 YY1 FOS SP5 ZHX2 MIR606 ENSG00000236842 LRMDA ZNF503 ZNF503-AS2 GC10P075790 GC10M075724
GH10I075610 Enhancer 0.9 Ensembl ENCODE 10.9 +59.1 59097 1.3 HDGF EBF1 RELA ATF7 ZSCAN29 IKZF2 SMARCA5 ZNF3 ZNF687 NR2F1 LRMDA MIR606 ENSG00000236842 ZNF503 ZNF503-AS2 GC10M075584 GC10P075624
GH10I075606 Enhancer 0.8 ENCODE 11.3 +54.0 53995 0.9 HDGF SOX13 FOXA2 SAP130 MAX EBF1 RAD21 YY1 ZNF335 HNF4G MIR606 LRMDA ENSG00000236842 GC10M075584 GC10P075624
GH10I075623 Enhancer 0.8 UCNEbase 11.3 +71.4 71423 0.3 MAFG FEZF1 ZNF316 ZNF624 BCL6B ZNF600 PRDM1 EMSY MAFK GC10P075624 MIR606 ZNF503-AS2 ZNF503 ENSG00000236842 LRMDA GC10M075584
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR606 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR606 Gene

Genomic Locations for MIR606 Gene
chr10:75,552,458-75,552,553
(GRCh38/hg38)
Size:
96 bases
Orientation:
Plus strand
chr10:77,312,216-77,312,311
(GRCh37/hg19)

Genomic View for MIR606 Gene

Genes around MIR606 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR606 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR606 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR606 Gene

Proteins for MIR606 Gene

Post-translational modifications for MIR606 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR606 Gene

Domains & Families for MIR606 Gene

Gene Families for MIR606 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR606: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR606 Gene

Function for MIR606 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR606 Gene

Localization for MIR606 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR606 Gene

Pathways & Interactions for MIR606 Gene

SuperPathways for MIR606 Gene

No Data Available

Interacting Proteins for MIR606 Gene

Gene Ontology (GO) - Biological Process for MIR606 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR606 Gene

Drugs & Compounds for MIR606 Gene

No Compound Related Data Available

Transcripts for MIR606 Gene

mRNA/cDNA for MIR606 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR606 Gene

No ASD Table

Relevant External Links for MIR606 Gene

GeneLoc Exon Structure for
MIR606
ECgene alternative splicing isoforms for
MIR606

Expression for MIR606 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR606 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR606 Gene:

MIR606
genes like me logo Genes that share expression patterns with MIR606: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR606 Gene

Orthologs for MIR606 Gene

Evolution for MIR606 Gene

ENSEMBL:
Gene Tree for MIR606 (if available)
TreeFam:
Gene Tree for MIR606 (if available)

No data available for Orthologs for MIR606 Gene

Paralogs for MIR606 Gene

No data available for Paralogs for MIR606 Gene

Variants for MIR606 Gene

Sequence variations from dbSNP and Humsavar for MIR606 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1003444529 -- 75,551,398(+) A/G upstream_transcript_variant
rs1003519844 -- 75,551,181(+) C/G upstream_transcript_variant
rs1003631869 -- 75,551,088(+) A/G upstream_transcript_variant
rs1003684510 -- 75,551,457(+) T/C upstream_transcript_variant
rs1006592526 -- 75,551,667(+) C/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR606 Gene

Variant ID Type Subtype PubMed ID
esv2759768 CNV gain+loss 17122850
nsv1036391 CNV gain 25217958

Additional Variant Information for MIR606 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR606

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR606 Gene

Disorders for MIR606 Gene

Additional Disease Information for MIR606

No disorders were found for MIR606 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR606 Gene

Publications for MIR606 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58
  2. The colorectal microRNAome. (PMID: 16505370) Cummins JM … Velculescu VE (Proceedings of the National Academy of Sciences of the United States of America 2006) 3 58

Products for MIR606 Gene

Sources for MIR606 Gene

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