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Aliases for MIR604 Gene

Subcategory (RNA class) for MIR604 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR604 Gene

  • MicroRNA 604 2 3
  • Hsa-Mir-604 3
  • MIRN604 3

External Ids for MIR604 Gene

Previous Symbols for MIR604 Gene

  • MIRN604

Summaries for MIR604 Gene

Entrez Gene Summary for MIR604 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR604 Gene

MIR604 (MicroRNA 604) is a RNA Gene, and belongs to miRNA RNA class. Diseases associated with MIR604 include esophageal cancer.

fRNAdb sequence ontologies for MIR604 Gene

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

View fRNAdb secondary structures for MIR604

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR604 Gene

Genomics for MIR604 Gene

Genomic Location for MIR604 Gene

Start:
29,545,004 bp from pter
End:
29,545,097 bp from pter
Size:
94 bases
Orientation:
Minus strand

Genomic View for MIR604 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR604 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR604 Gene

ORGUL Member Location for MIR604 Gene

ORGUL Member Location for MIR604 gene

No data available for Regulatory Elements for MIR604 Gene

Proteins for MIR604 Gene

Post-translational modifications for MIR604 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR604 Gene

Domains for MIR604 Gene

Gene Families for MIR604 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs
genes like me logo Genes that share domains with MIR604: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for MIR604 Gene

Function for MIR604 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR604 Gene

Localization for MIR604 Gene

No data available for Gene Ontology (GO) - Cellular Components for MIR604 Gene

Pathways for MIR604 Gene

SuperPathways for MIR604 Gene

No Data Available

Interacting Proteins for MIR604 Gene

Gene Ontology (GO) - Biological Process for MIR604 Gene

None

No data available for Pathways by source for MIR604 Gene

Transcripts for MIR604 Gene

fRNAdb Secondary structures for MIR604 Gene

  • hsa-mir-604_MI0003617_Homo_sapiens_miR-604_stem-loop_hairpin

mRNA/cDNA for MIR604 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR604 Gene

No ASD Table

Relevant External Links for MIR604 Gene

GeneLoc Exon Structure for
MIR604
ECgene alternative splicing isoforms for
MIR604

Expression for MIR604 Gene

mRNA expression in normal human tissues for MIR604 Gene

genes like me logo Genes that share expressions with MIR604: view

Orthologs for MIR604 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR604 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-604 37
  • 97 (a)
OneToOne
Species with no ortholog for MIR604:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR604 Gene

ENSEMBL:
Gene Tree for MIR604 (if available)
TreeFam:
Gene Tree for MIR604 (if available)

Paralogs for MIR604 Gene

No data available for Paralogs for MIR604 Gene

Variants for MIR604 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR604 Gene

Variant ID Type Subtype PubMed ID
nsv831819 CNV Loss 17160897

Relevant External Links for MIR604 Gene

HapMap Linkage Disequilibrium report
MIR604

No data available for Sequence variations from dbSNP and Humsavar for MIR604 Gene

Disorders for MIR604 Gene

(1) MalaCards Diseases for MIR604 Gene

Search for MIR604 Gene in MalaCards »

Relevant External Links for MIR604

Genetic Association Database (GAD)
MIR604
Human Genome Epidemiology (HuGE) Navigator
MIR604
genes like me logo Genes that share disorders with MIR604: view

No data available for UniProtKB/Swiss-Prot for MIR604 Gene

Publications for MIR604 Gene

  1. Genetic variations in microRNA-related genes are novel susceptibility loci for esophageal cancer risk. (PMID: 19138993) Ye Y. … Wu X. (Cancer Prev Res (Phila) 2008) 3 49
  2. Genetic variation in MicroRNA genes and risk of oral premalignant lesions. (PMID: 19851984) Clague J. … Wu X. (Mol. Carcinog. 2010) 3 49
  3. Genetic variations in microRNA-related genes are associated with survival and recurrence in patients with renal cell carcinoma. (PMID: 20732906) Lin J. … Wu X. (Carcinogenesis 2010) 3 49
  4. Role of primary miRNA polymorphic variants in metastatic colon cancer patients treated with 5-fluorouracil and irinotecan. (PMID: 20585341) Boni V. … Aranda E. (Pharmacogenomics J. 2011) 3
  5. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3

Products for MIR604 Gene

Sources for MIR604 Gene

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