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Aliases for MIR600HG Gene

Subcategory (RNA class) for MIR600HG Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR600HG Gene

  • MIR600 Host Gene 2 3 5
  • MIR600 Host Gene (Non-Protein Coding) 2 3
  • Chromosome 9 Open Reading Frame 45 2
  • Non-Protein Coding RNA 287 2
  • NCRNA00287 3
  • C9orf45 3
  • GL012 3

External Ids for MIR600HG Gene

Previous HGNC Symbols for MIR600HG Gene

  • C9orf45
  • NCRNA00287

Previous GeneCards Identifiers for MIR600HG Gene

  • GC09M125877
  • GC09M125878
  • GC09M125893
  • GC09M125915
  • GC09M125935
  • GC09M125960

Summaries for MIR600HG Gene

GeneCards Summary for MIR600HG Gene

MIR600HG (MIR600 Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR600HG Gene

Genomics for MIR600HG Gene

Regulatory Elements for MIR600HG Gene

Enhancers for MIR600HG Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around MIR600HG on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR600HG Gene

Chromosome:
9
Start:
123,109,494 bp from pter
End:
123,115,477 bp from pter
Size:
5,984 bases
Orientation:
Minus strand

Genomic View for MIR600HG Gene

Genes around MIR600HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR600HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR600HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR600HG Gene

Proteins for MIR600HG Gene

Post-translational modifications for MIR600HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR600HG Gene

Domains & Families for MIR600HG Gene

Gene Families for MIR600HG Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR600HG: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR600HG Gene

Function for MIR600HG Gene

Phenotypes for MIR600HG Gene

GenomeRNAi human phenotypes for MIR600HG:
genes like me logo Genes that share phenotypes with MIR600HG: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR600HG Gene

Localization for MIR600HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR600HG Gene

Pathways & Interactions for MIR600HG Gene

SuperPathways for MIR600HG Gene

No Data Available

Interacting Proteins for MIR600HG Gene

Gene Ontology (GO) - Biological Process for MIR600HG Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR600HG Gene

Drugs & Compounds for MIR600HG Gene

No Compound Related Data Available

Transcripts for MIR600HG Gene

mRNA/cDNA for MIR600HG Gene

Unigene Clusters for MIR600HG Gene

MIR600 host gene (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MIR600HG Gene

No ASD Table

Relevant External Links for MIR600HG Gene

GeneLoc Exon Structure for
MIR600HG
ECgene alternative splicing isoforms for
MIR600HG

Expression for MIR600HG Gene

mRNA expression in normal human tissues for MIR600HG Gene

mRNA differential expression in normal tissues according to GTEx for MIR600HG Gene

This gene is overexpressed in Brain - Cortex (x4.1).

SOURCE GeneReport for Unigene cluster for MIR600HG Gene Hs.708072

genes like me logo Genes that share expression patterns with MIR600HG: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR600HG Gene

Orthologs for MIR600HG Gene

Evolution for MIR600HG Gene

ENSEMBL:
Gene Tree for MIR600HG (if available)
TreeFam:
Gene Tree for MIR600HG (if available)

No data available for Orthologs for MIR600HG Gene

Paralogs for MIR600HG Gene

No data available for Paralogs for MIR600HG Gene

Variants for MIR600HG Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR600HG Gene

Variant ID Type Subtype PubMed ID
nsv893825 CNV Gain 21882294
nsv831717 CNV Gain 17160897
nsv517807 CNV Loss 19592680

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Variation tolerance and Relevant External Links for MIR600HG Gene

Disorders for MIR600HG Gene

Relevant External Links for MIR600HG

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR600HG

No disorders were found for MIR600HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR600HG Gene

Publications for MIR600HG Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 67
  2. Ubiquitin-mediated proteolysis of HuR by heat shock. (PMID: 19322201) Abdelmohsen K. … Gorospe M. (EMBO J. 2009) 3
  3. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  5. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 3

Products for MIR600HG Gene

Sources for MIR600HG Gene

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