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Aliases for MIR600HG Gene

Subcategory (RNA class) for MIR600HG Gene


Quality Score for this RNA gene is


Aliases for MIR600HG Gene

  • MIR600 Host Gene 2 3 5
  • MIR600 Host Gene (Non-Protein Coding) 2 3
  • Chromosome 9 Open Reading Frame 45 2
  • Non-Protein Coding RNA 287 2
  • NCRNA00287 3
  • C9orf45 3
  • GL012 3

External Ids for MIR600HG Gene

Previous HGNC Symbols for MIR600HG Gene

  • C9orf45
  • NCRNA00287

Previous GeneCards Identifiers for MIR600HG Gene

  • GC09M125877
  • GC09M125878
  • GC09M125893
  • GC09M125915
  • GC09M125935
  • GC09M125960

Summaries for MIR600HG Gene

GeneCards Summary for MIR600HG Gene

MIR600HG (MIR600 Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR600HG Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR600HG Gene

Genomics for MIR600HG Gene

Regulatory Elements for MIR600HG Gene

Enhancers for MIR600HG Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H123355 1.5 Ensembl ENCODE dbSUPER 10.8 -243.0 -243044 6.2 HDGF ATF1 MLX ZFP64 ARID4B TCF12 GLIS2 CBX5 GATA2 ATF7 STRBP MIR601 DENND1A MIR600HG MIR600 CRB2 GC09P123401
GH09H123304 1.5 Ensembl ENCODE dbSUPER 10.7 -189.4 -189431 1.3 PKNOX1 ATF1 ARNT TCF12 ZNF766 GLIS2 GATA2 ELK1 KLF7 ATF7 ZBTB26 RC3H2 STRBP MIR600HG MIR600 GC09M123300 LOC105376265
GH09H123048 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.4 +66.1 66070 2.2 GTF2F1 STAT1 CEBPB FEZF1 NR3C1 EP300 OSR2 PRDM6 ZBTB48 HNF4G MIR600 MIR600HG RABGAP1 LOC100422501 GPR21
GH09H123364 1.2 FANTOM5 ENCODE dbSUPER 10.8 -249.1 -249062 0.7 TFAP4 MAZ BHLHE40 ZNF398 HIC1 ZFHX2 JUND ZNF157 FOS EGR2 MIR601 DENND1A MIR600 MIR600HG STRBP CRB2 GC09P123401
GH09H123173 1.1 Ensembl ENCODE 10.7 -59.8 -59815 4.2 PKNOX1 TBL1XR1 RB1 BACH1 SIN3A BMI1 BATF RELA GATA3 POLR2A MIR600HG MIR600 STRBP RABGAP1 GC09M123176 PIR44660
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR600HG on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR600HG Gene

Genomic Locations for MIR600HG Gene
5,984 bases
Minus strand

Genomic View for MIR600HG Gene

Genes around MIR600HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR600HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR600HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR600HG Gene

Proteins for MIR600HG Gene

Post-translational modifications for MIR600HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR600HG Gene

Domains & Families for MIR600HG Gene

Gene Families for MIR600HG Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR600HG: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR600HG Gene

Function for MIR600HG Gene

Phenotypes From GWAS Catalog for MIR600HG Gene

Phenotypes for MIR600HG Gene

GenomeRNAi human phenotypes for MIR600HG:
genes like me logo Genes that share phenotypes with MIR600HG: view

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR600HG Gene

Localization for MIR600HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR600HG Gene

Pathways & Interactions for MIR600HG Gene

SuperPathways for MIR600HG Gene

No Data Available

Interacting Proteins for MIR600HG Gene

Gene Ontology (GO) - Biological Process for MIR600HG Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR600HG Gene

Drugs & Compounds for MIR600HG Gene

No Compound Related Data Available

Transcripts for MIR600HG Gene

mRNA/cDNA for MIR600HG Gene

Unigene Clusters for MIR600HG Gene

MIR600 host gene (non-protein coding):
Representative Sequences:

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR600HG Gene

No ASD Table

Relevant External Links for MIR600HG Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR600HG Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR600HG Gene

mRNA differential expression in normal tissues according to GTEx for MIR600HG Gene

This gene is overexpressed in Brain - Cortex (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of MIR600HG Gene:


SOURCE GeneReport for Unigene cluster for MIR600HG Gene:

genes like me logo Genes that share expression patterns with MIR600HG: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR600HG Gene

Orthologs for MIR600HG Gene

Evolution for MIR600HG Gene

Gene Tree for MIR600HG (if available)
Gene Tree for MIR600HG (if available)

No data available for Orthologs for MIR600HG Gene

Paralogs for MIR600HG Gene

No data available for Paralogs for MIR600HG Gene

Variants for MIR600HG Gene

Sequence variations from dbSNP and Humsavar for MIR600HG Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1000054217 -- 123,114,715(+) CTGCC(C/T)TCCCC intron-variant, nc-transcript-variant
rs1001035383 -- 123,115,802(+) GCTGC(G/T)CTCTC intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1001066922 -- 123,113,585(+) AAAAC(C/T)TAAGT intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1001136641 -- 123,113,377(+) CATCC(A/G)TTATC intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1001251889 -- 123,110,992(+) GATCG(C/G)GGGTA intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for MIR600HG Gene

Variant ID Type Subtype PubMed ID
nsv831717 CNV gain 17160897
nsv517807 CNV loss 19592680

Relevant External Links for MIR600HG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR600HG Gene

Disorders for MIR600HG Gene

Relevant External Links for MIR600HG

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR600HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR600HG Gene

Publications for MIR600HG Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 60
  2. Ubiquitin-mediated proteolysis of HuR by heat shock. (PMID: 19322201) Abdelmohsen K … Gorospe M (The EMBO journal 2009) 3 60
  3. The full-ORF clone resource of the German cDNA Consortium. (PMID: 17974005) Bechtel S … Schupp I (BMC genomics 2007) 3 60
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60
  5. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray SJ … Dunham I (Nature 2004) 3 60

Products for MIR600HG Gene

Sources for MIR600HG Gene

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