Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR600HG Gene

Subcategory (RNA class) for MIR600HG Gene


Quality Score for this RNA gene is


Aliases for MIR600HG Gene

  • MIR600 Host Gene 2 3 5
  • MIR600 Host Gene (Non-Protein Coding) 2 3
  • Chromosome 9 Open Reading Frame 45 2
  • Non-Protein Coding RNA 287 2
  • NCRNA00287 3
  • C9orf45 3
  • GL012 3

External Ids for MIR600HG Gene

Previous HGNC Symbols for MIR600HG Gene

  • C9orf45
  • NCRNA00287

Previous GeneCards Identifiers for MIR600HG Gene

  • GC09M125877
  • GC09M125878
  • GC09M125893
  • GC09M125915
  • GC09M125935
  • GC09M125960

Summaries for MIR600HG Gene

GeneCards Summary for MIR600HG Gene

MIR600HG (MIR600 Host Gene) is an RNA Gene, and is affiliated with the miRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR600HG Gene

Genomics for MIR600HG Gene

Regulatory Elements for MIR600HG Gene

Enhancers for MIR600HG Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F123355 1.3 Ensembl ENCODE 10.8 -243.0 -243044 6.2 HDGF ATF1 CREB3L1 MLX ZFP64 ARID4B ZNF48 GLIS2 GATA2 KDM4B STRBP MIR601 DENND1A MIR600 MIR600HG CRB2 GC09P123401
GH09F123304 1.3 Ensembl ENCODE 10.7 -189.4 -189424 1.5 PKNOX1 ATF1 ARNT ZNF48 GLIS2 ELK1 GATA2 KLF7 KLF13 NCOA1 ZBTB26 ENSG00000261094 STRBP ZBTB6 MIR600 MIR600HG GC09M123300 LOC105376265
GH09F123048 1.2 FANTOM5 Ensembl ENCODE 10.4 +66.1 66070 2.2 GTF2F1 STAT1 MTA2 CEBPB JUNB FEZF1 NR3C1 TBX21 EP300 OSR2 MIR600 MIR600HG RABGAP1 LOC100422501 GPR21
GH09F123302 1.1 Ensembl ENCODE 10.7 -187.4 -187415 1.1 HDGF HDAC1 TBL1XR1 ZBTB40 NCOA1 ZEB2 ELF1 SMARCA4 GLIS1 ZNF341 STRBP MIR600 MIR600HG GC09M123300 LOC105376265
GH09F123173 1.1 Ensembl ENCODE 10.6 -59.8 -59815 4.2 TBP PKNOX1 MXI1 TBL1XR1 BMI1 RELA YY1 CBX5 POLR2A SCRT2 MIR600 MIR600HG STRBP RABGAP1 PIR44660 GC09M123162
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR600HG on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR600HG Gene

123,109,494 bp from pter
123,115,477 bp from pter
5,984 bases
Minus strand

Genomic View for MIR600HG Gene

Genes around MIR600HG on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR600HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR600HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR600HG Gene

Proteins for MIR600HG Gene

Post-translational modifications for MIR600HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR600HG Gene

Domains & Families for MIR600HG Gene

Gene Families for MIR600HG Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR600HG: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR600HG Gene

Function for MIR600HG Gene

Phenotypes for MIR600HG Gene

GenomeRNAi human phenotypes for MIR600HG:
genes like me logo Genes that share phenotypes with MIR600HG: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR600HG Gene

Localization for MIR600HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR600HG Gene

Pathways & Interactions for MIR600HG Gene

SuperPathways for MIR600HG Gene

No Data Available

Interacting Proteins for MIR600HG Gene

Gene Ontology (GO) - Biological Process for MIR600HG Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR600HG Gene

Transcripts for MIR600HG Gene

mRNA/cDNA for MIR600HG Gene

Unigene Clusters for MIR600HG Gene

MIR600 host gene (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for MIR600HG Gene

No ASD Table

Relevant External Links for MIR600HG Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR600HG Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR600HG Gene

mRNA differential expression in normal tissues according to GTEx for MIR600HG Gene

This gene is overexpressed in Brain - Cortex (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of MIR600HG Gene:


SOURCE GeneReport for Unigene cluster for MIR600HG Gene:

genes like me logo Genes that share expression patterns with MIR600HG: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR600HG Gene

Orthologs for MIR600HG Gene

Evolution for MIR600HG Gene

Gene Tree for MIR600HG (if available)
Gene Tree for MIR600HG (if available)

No data available for Orthologs for MIR600HG Gene

Paralogs for MIR600HG Gene

No data available for Paralogs for MIR600HG Gene

Variants for MIR600HG Gene

Sequence variations from dbSNP and Humsavar for MIR600HG Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1001774 -- 123,116,679(+) CATCA(C/G)AGAGA intron-variant, upstream-variant-2KB
rs112235341 -- 123,117,170(+) AGGCG(C/T)TCATT intron-variant, upstream-variant-2KB
rs112786595 -- 123,114,085(+) GCTGC(C/T)TGCAG intron-variant, nc-transcript-variant
rs113173903 -- 123,114,018(+) CCCAT(A/G)TATTT intron-variant, nc-transcript-variant
rs113213803 -- 123,111,420(+) GGAAA(A/G)GAAAA intron-variant, nc-transcript-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for MIR600HG Gene

Variant ID Type Subtype PubMed ID
nsv831717 CNV gain 17160897
nsv517807 CNV loss 19592680

Relevant External Links for MIR600HG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR600HG Gene

Disorders for MIR600HG Gene

Relevant External Links for MIR600HG

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR600HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR600HG Gene

Publications for MIR600HG Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64
  2. Ubiquitin-mediated proteolysis of HuR by heat shock. (PMID: 19322201) Abdelmohsen K. … Gorospe M. (EMBO J. 2009) 3 64
  3. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 3 64
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  5. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 3 64

Products for MIR600HG Gene

Sources for MIR600HG Gene

Loading form....