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Aliases for MIR575 Gene

Subcategory (RNA class) for MIR575 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR575 Gene

  • MicroRNA 575 2 3
  • Hsa-Mir-575 3
  • MIRN575 3

External Ids for MIR575 Gene

Previous HGNC Symbols for MIR575 Gene

  • MIRN575

Previous GeneCards Identifiers for MIR575 Gene

  • GC04M083896
  • GC04M083674

Summaries for MIR575 Gene

Entrez Gene Summary for MIR575 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR575 Gene

MIR575 (MicroRNA 575) is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for MIR575 Gene

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR575 Gene

Genomics for MIR575 Gene

Genomic Location for MIR575 Gene

Start:
82,753,337 bp from pter
End:
82,753,430 bp from pter
Size:
94 bases
Orientation:
Minus strand

Genomic View for MIR575 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR575 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR575 Gene

ORGUL Member Location for MIR575 Gene

ORGUL Member Location for MIR575 gene

No data available for Regulatory Elements for MIR575 Gene

Proteins for MIR575 Gene

Post-translational modifications for MIR575 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR575 Gene

Domains for MIR575 Gene

Gene Families for MIR575 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR575: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR575 Gene

Function for MIR575 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR575 Gene

Localization for MIR575 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR575 Gene

Pathways for MIR575 Gene

SuperPathways for MIR575 Gene

No Data Available

Interacting Proteins for MIR575 Gene

Gene Ontology (GO) - Biological Process for MIR575 Gene

None

No data available for Pathways by source for MIR575 Gene

Transcripts for MIR575 Gene

mRNA/cDNA for MIR575 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for MIR575

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR575 Gene

No ASD Table

Relevant External Links for MIR575 Gene

GeneLoc Exon Structure for
MIR575
ECgene alternative splicing isoforms for
MIR575

Expression for MIR575 Gene

mRNA expression in normal human tissues for MIR575 Gene

genes like me logo Genes that share expressions with MIR575: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for MIR575 Gene

Orthologs for MIR575 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR575 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-575 36
  • 100 (a)
OneToOne
Species with no ortholog for MIR575:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR575 Gene

ENSEMBL:
Gene Tree for MIR575 (if available)
TreeFam:
Gene Tree for MIR575 (if available)

Paralogs for MIR575 Gene

No data available for Paralogs for MIR575 Gene

Variants for MIR575 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR575 Gene

Variant ID Type Subtype PubMed ID
nsv879511 CNV Loss 21882294

Relevant External Links for MIR575 Gene

HapMap Linkage Disequilibrium report
MIR575

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for MIR575 Gene

Disorders for MIR575 Gene

No disorders were found for MIR575 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for MIR575 Gene

Publications for MIR575 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. The colorectal microRNAome. (PMID: 16505370) Cummins J.M. … Velculescu V.E. (Proc. Natl. Acad. Sci. U.S.A. 2006) 3

Products for MIR575 Gene

Sources for MIR575 Gene

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