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Aliases for MIR5704 Gene

Subcategory (RNA class) for MIR5704 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR5704 Gene

  • MicroRNA 5704 2 3 5
  • Hsa-Mir-5704 3

External Ids for MIR5704 Gene

Previous GeneCards Identifiers for MIR5704 Gene

  • GC03U901818
  • GC03M131706

Summaries for MIR5704 Gene

Entrez Gene Summary for MIR5704 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5704 Gene

MIR5704 (MicroRNA 5704) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR5704 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5704 Gene

Genomics for MIR5704 Gene

Regulatory Elements for MIR5704 Gene

Enhancers for MIR5704 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H132029 0.7 ENCODE 0.3 -43.5 -43501 0 CTCF RAD21 CTBP1 GATA3 SMC3 ZNF143 DEK ZNF654 TRIM22 MIER2 GC03P132040 MIR5704
GH03H132034 1 ENCODE 0.2 -49.2 -49151 0 ARID4B SIN3A DMAP1 ZNF2 ZNF766 ZNF143 SP3 SP5 MXD4 MIER2 GC03P132040 MIR5704
GH03H131902 0.6 ENCODE 0.2 +81.9 81921 2 JUND TEAD1 CEBPA TCF7 FOS TEAD3 CPNE4 ENSG00000248468 MIR5704 LOC105374113
GH03H132023 0.3 FANTOM5 0.3 -38.0 -38033 0 CPNE4 GC03P132040 MIR5704
GH03H131958 0.2 ENCODE 0.3 +27.8 27780 0 CPNE4 MIR5704 LOC105374113
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR5704 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR5704 Gene

Chromosome:
3
Start:
131,985,855 bp from pter
End:
131,985,931 bp from pter
Size:
77 bases
Orientation:
Minus strand

Genomic View for MIR5704 Gene

Genes around MIR5704 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5704 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5704 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5704 Gene

Proteins for MIR5704 Gene

Post-translational modifications for MIR5704 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5704 Gene

Domains & Families for MIR5704 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5704 Gene

Function for MIR5704 Gene

Animal Model Products

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR5704
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5704 Gene

Localization for MIR5704 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR5704 Gene

Pathways & Interactions for MIR5704 Gene

SuperPathways for MIR5704 Gene

No Data Available

Interacting Proteins for MIR5704 Gene

Gene Ontology (GO) - Biological Process for MIR5704 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR5704 Gene

Drugs & Compounds for MIR5704 Gene

No Compound Related Data Available

Transcripts for MIR5704 Gene

mRNA/cDNA for MIR5704 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Clone Products

  • Applied Biological Materials Clones for MIR5704
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5704 Gene

No ASD Table

Relevant External Links for MIR5704 Gene

GeneLoc Exon Structure for
MIR5704
ECgene alternative splicing isoforms for
MIR5704

Expression for MIR5704 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5704 Gene:

MIR5704
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR5704 Gene

Orthologs for MIR5704 Gene

Evolution for MIR5704 Gene

ENSEMBL:
Gene Tree for MIR5704 (if available)
TreeFam:
Gene Tree for MIR5704 (if available)

No data available for Orthologs for MIR5704 Gene

Paralogs for MIR5704 Gene

No data available for Paralogs for MIR5704 Gene

Variants for MIR5704 Gene

Sequence variations from dbSNP and Humsavar for MIR5704 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000510029 -- 131,985,872(+) GGCCA(C/T)CATCC intron-variant, nc-transcript-variant
rs1002233120 -- 131,987,812(+) TCTGA(C/T)GCTCG intron-variant, upstream-variant-2KB
rs1004070430 -- 131,986,724(+) ACCCA(A/G)TCTCT intron-variant, upstream-variant-2KB
rs1005868399 -- 131,986,843(+) AAAAA(A/C)AAAAA intron-variant, upstream-variant-2KB
rs1007095246 -- 131,987,463(+) CTCAC(C/T)GTAAC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR5704 Gene

Variant ID Type Subtype PubMed ID
dgv8591n54 CNV loss 21841781
nsv1006656 CNV gain 25217958
nsv508244 CNV deletion 20534489
nsv511224 CNV loss 21212237
nsv591727 CNV gain 21841781
nsv829727 CNV gain+loss 17160897

Relevant External Links for MIR5704 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR5704

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5704 Gene

Disorders for MIR5704 Gene

Relevant External Links for MIR5704

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR5704

No disorders were found for MIR5704 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5704 Gene

Publications for MIR5704 Gene

  1. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A … Wang Y (PloS one 2011) 3 60
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR5704 Gene

Sources for MIR5704 Gene

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