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Aliases for MIR5704 Gene

Subcategory (RNA class) for MIR5704 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR5704 Gene

  • MicroRNA 5704 2 3 5
  • Hsa-Mir-5704 3

External Ids for MIR5704 Gene

Previous GeneCards Identifiers for MIR5704 Gene

  • GC03U901818
  • GC03M131706

Summaries for MIR5704 Gene

Entrez Gene Summary for MIR5704 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5704 Gene

MIR5704 (MicroRNA 5704) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5704 Gene

Genomics for MIR5704 Gene

Regulatory Elements for MIR5704 Gene

Enhancers for MIR5704 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F131960 0.6 Ensembl 0.3 +25.6 25555 0.8 CPNE4 MIR5704 LOC105374113
GH03F131958 0.4 ENCODE 0.3 +27.8 27780 0.2 TEAD4 CPNE4 MIR5704 LOC105374113
GH03F132023 0.3 FANTOM5 0.3 -38.0 -38033 0.3 CPNE4 GC03P132040 MIR5704
GH03F132029 0.9 ENCODE 0.2 -43.5 -43501 0.1 CTCF ZNF654 WRNIP1 TRIM22 MIER2 REST RAD21 ZFP69B GATA3 CTBP1 GC03P132040 MIR5704
GH03F132034 1 Ensembl ENCODE 0.2 -49.0 -49045 0.9 WRNIP1 ARID4B SIN3A DMAP1 ZNF48 ZNF2 ZNF143 SP3 SP5 MXD4 CPNE4 GC03P132040 MIR5704
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR5704 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR5704 Gene

Chromosome:
3
Start:
131,985,855 bp from pter
End:
131,985,931 bp from pter
Size:
77 bases
Orientation:
Minus strand

Genomic View for MIR5704 Gene

Genes around MIR5704 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5704 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5704 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5704 Gene

Proteins for MIR5704 Gene

Post-translational modifications for MIR5704 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5704 Gene

Domains & Families for MIR5704 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5704 Gene

Function for MIR5704 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5704 Gene

Localization for MIR5704 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5704 Gene

Pathways & Interactions for MIR5704 Gene

SuperPathways for MIR5704 Gene

No Data Available

Interacting Proteins for MIR5704 Gene

Gene Ontology (GO) - Biological Process for MIR5704 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR5704 Gene

Transcripts for MIR5704 Gene

mRNA/cDNA for MIR5704 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5704 Gene

No ASD Table

Relevant External Links for MIR5704 Gene

GeneLoc Exon Structure for
MIR5704
ECgene alternative splicing isoforms for
MIR5704

Expression for MIR5704 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5704 Gene:

MIR5704
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR5704 Gene

Orthologs for MIR5704 Gene

Evolution for MIR5704 Gene

ENSEMBL:
Gene Tree for MIR5704 (if available)
TreeFam:
Gene Tree for MIR5704 (if available)

No data available for Orthologs for MIR5704 Gene

Paralogs for MIR5704 Gene

No data available for Paralogs for MIR5704 Gene

Variants for MIR5704 Gene

Sequence variations from dbSNP and Humsavar for MIR5704 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs112652096 -- 131,986,868(+) CAAAC(-/A)AAAAA intron-variant, upstream-variant-2KB
rs113347520 -- 131,987,688(+) GCCCA(G/T)CCAAG intron-variant, upstream-variant-2KB
rs1141432 -- 131,987,529(-) catgc(C/T)tgtaa intron-variant, upstream-variant-2KB
rs114255315 -- 131,986,104(+) GTCAT(C/T)GCTTG intron-variant, upstream-variant-2KB
rs116816443 -- 131,987,705(+) ACTTT(C/T)AGATT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR5704 Gene

Variant ID Type Subtype PubMed ID
dgv8591n54 CNV loss 21841781
nsv1006656 CNV gain 25217958
nsv508244 CNV deletion 20534489
nsv511224 CNV loss 21212237
nsv591727 CNV gain 21841781
nsv829727 CNV gain+loss 17160897

Relevant External Links for MIR5704 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR5704

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5704 Gene

Disorders for MIR5704 Gene

Relevant External Links for MIR5704

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR5704

No disorders were found for MIR5704 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5704 Gene

Publications for MIR5704 Gene

  1. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A. … Wang Y. (PLoS ONE 2011) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR5704 Gene

Sources for MIR5704 Gene

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