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Aliases for MIR5702 Gene

Subcategory (RNA class) for MIR5702 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR5702 Gene

  • MicroRNA 5702 2 3 5
  • Hsa-Mir-5702 3

External Ids for MIR5702 Gene

Previous GeneCards Identifiers for MIR5702 Gene

  • GC02U902495
  • GC02M227525

Summaries for MIR5702 Gene

Entrez Gene Summary for MIR5702 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5702 Gene

MIR5702 (MicroRNA 5702) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5702 Gene

Genomics for MIR5702 Gene

Regulatory Elements for MIR5702 Gene

Enhancers for MIR5702 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G226660 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -2.7 -2711 2.9 FEZF1 YY1 TCF12 GATA2 FOS SP3 MEF2D MAFF PBX2 GLIS1 IRS1 MIR5702 GC02P226775
GH02G226655 1.2 ENCODE dbSUPER 0.7 +1.6 1560 3.8 FOXA2 MLX FEZF1 YY1 SLC30A9 SP5 ZHX2 PPARG KAT8 PBX2 MIR5702 GC02P226528
GH02G226649 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.2 7198 5.1 PKNOX1 FOXA2 ATF1 MLX ZFP64 ARID4B FEZF1 DMAP1 ZNF48 ZBTB7B IRS1 MIR5702 GC02P226528
GH02G226673 1.4 Ensembl ENCODE dbSUPER 0.4 -14.8 -14758 0.8 FEZF1 ZEB1 GATA2 ZNF366 ZSCAN5C RCOR1 ZNF548 ZNF391 DEK CEBPB MIR5702 GC02P226775
GH02G226643 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +14.4 14402 1.4 CHD1 RAD21 MIR5702 GC02P226528
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR5702 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR5702 Gene

Chromosome:
2
Start:
226,658,710 bp from pter
End:
226,658,793 bp from pter
Size:
84 bases
Orientation:
Minus strand

Genomic View for MIR5702 Gene

Genes around MIR5702 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5702 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5702 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5702 Gene

ORGUL Member Location for MIR5702 Gene

ORGUL Member Location for MIR5702 gene

Proteins for MIR5702 Gene

Post-translational modifications for MIR5702 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5702 Gene

Domains & Families for MIR5702 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5702 Gene

Function for MIR5702 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5702 Gene

Localization for MIR5702 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5702 Gene

Pathways & Interactions for MIR5702 Gene

SuperPathways for MIR5702 Gene

No Data Available

Interacting Proteins for MIR5702 Gene

Gene Ontology (GO) - Biological Process for MIR5702 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR5702 Gene

Transcripts for MIR5702 Gene

mRNA/cDNA for MIR5702 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5702 Gene

No ASD Table

Relevant External Links for MIR5702 Gene

GeneLoc Exon Structure for
MIR5702
ECgene alternative splicing isoforms for
MIR5702

Expression for MIR5702 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR5702 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5702 Gene:

MIR5702
genes like me logo Genes that share expression patterns with MIR5702: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR5702 Gene

Orthologs for MIR5702 Gene

Evolution for MIR5702 Gene

ENSEMBL:
Gene Tree for MIR5702 (if available)
TreeFam:
Gene Tree for MIR5702 (if available)

No data available for Orthologs for MIR5702 Gene

Paralogs for MIR5702 Gene

No data available for Paralogs for MIR5702 Gene

Variants for MIR5702 Gene

Sequence variations from dbSNP and Humsavar for MIR5702 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000025646 -- 226,659,251(+) TCTCC(G/T)CTGTC upstream-variant-2KB
rs1000099498 -- 226,660,510(+) GGTGG(G/T)CTTAC upstream-variant-2KB
rs1001335540 -- 226,658,258(+) CATGG(C/T)CTTTT downstream-variant-500B
rs1002206900 -- 226,658,608(+) CTTAA(A/C)CTTTT downstream-variant-500B
rs1003521540 -- 226,659,159(+) CCAGC(A/T)GCCAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR5702 Gene

Variant ID Type Subtype PubMed ID
nsv1011562 CNV loss 25217958
nsv584594 CNV gain 21841781

Relevant External Links for MIR5702 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR5702

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5702 Gene

Disorders for MIR5702 Gene

Relevant External Links for MIR5702

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR5702

No disorders were found for MIR5702 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5702 Gene

Publications for MIR5702 Gene

  1. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A. … Wang Y. (PLoS ONE 2011) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR5702 Gene

Sources for MIR5702 Gene

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