Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR5699 Gene

Subcategory (RNA class) for MIR5699 Gene


Quality Score for this RNA gene is


Aliases for MIR5699 Gene

  • MicroRNA 5699 2 3 5
  • Hsa-Mir-5699 3
  • Mir-5699 3

External Ids for MIR5699 Gene

Previous GeneCards Identifiers for MIR5699 Gene

  • GC10U901564

Summaries for MIR5699 Gene

Entrez Gene Summary for MIR5699 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5699 Gene

MIR5699 (MicroRNA 5699) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR5699 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5699 Gene

Genomics for MIR5699 Gene

Regulatory Elements for MIR5699 Gene

Enhancers for MIR5699 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H000645 0.5 dbSUPER 0.7 -4.5 -4519 1.4 ZFHX2 PRDM6 REST PRDM1 EGR2 MIR5699 PRR26
GH10H000642 0.5 ENCODE 0.7 -0.6 -618 0.2 ZNF217 KLF1 KLF4 MIR5699 PRR26
GH10H000641 0.4 dbSUPER 0.7 +0.3 320 0.8 ZNF121 MIR5699 PIR41309
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR5699 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR5699 Gene

Genomic Locations for MIR5699 Gene
90 bases
Minus strand

Genomic View for MIR5699 Gene

Genes around MIR5699 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5699 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5699 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5699 Gene

Proteins for MIR5699 Gene

Post-translational modifications for MIR5699 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5699 Gene

Domains & Families for MIR5699 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5699 Gene

Function for MIR5699 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5699 Gene

Localization for MIR5699 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR5699 Gene

Pathways & Interactions for MIR5699 Gene

SuperPathways for MIR5699 Gene

No Data Available

Interacting Proteins for MIR5699 Gene

Gene Ontology (GO) - Biological Process for MIR5699 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR5699 Gene

Drugs & Compounds for MIR5699 Gene

No Compound Related Data Available

Transcripts for MIR5699 Gene

mRNA/cDNA for MIR5699 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5699 Gene

No ASD Table

Relevant External Links for MIR5699 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR5699 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR5699 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5699 Gene:

genes like me logo Genes that share expression patterns with MIR5699: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR5699 Gene

Orthologs for MIR5699 Gene

Evolution for MIR5699 Gene

Gene Tree for MIR5699 (if available)
Gene Tree for MIR5699 (if available)

No data available for Orthologs for MIR5699 Gene

Paralogs for MIR5699 Gene

No data available for Paralogs for MIR5699 Gene

Variants for MIR5699 Gene

Sequence variations from dbSNP and Humsavar for MIR5699 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1000898043 -- 643,421(+) AGGCA(A/G)GAGAA intron-variant, upstream-variant-2KB
rs1001899609 -- 643,346(+) GTCTC(A/T)ACTAA intron-variant, upstream-variant-2KB
rs1002015537 -- 642,945(+) ACACC(G/T)GTAAT intron-variant, upstream-variant-2KB
rs1003507377 -- 642,300(+) GGGCC(A/T)CCGCC intron-variant, upstream-variant-2KB
rs1003696673 -- 641,921(+) AGGGG(A/G)CTGAG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR5699 Gene

Variant ID Type Subtype PubMed ID
nsv549764 CNV loss 21841781
nsv549753 CNV gain 21841781
nsv549751 CNV gain 21841781
nsv528733 CNV gain 19592680
esv2660097 CNV deletion 23128226
dgv651n100 CNV gain 25217958
dgv118n67 CNV gain 20364138

Relevant External Links for MIR5699 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5699 Gene

Disorders for MIR5699 Gene

Relevant External Links for MIR5699

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR5699 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5699 Gene

Publications for MIR5699 Gene

  1. Birth and expression evolution of mammalian microRNA genes. (PMID: 23034410) Meunier J … Kaessmann H (Genome research 2013) 3 60
  2. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 60
  3. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A … Wang Y (PloS one 2011) 3 60
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 60

Products for MIR5699 Gene

Sources for MIR5699 Gene

Loading form....