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Aliases for MIR5692C1 Gene

Subcategory (RNA class) for MIR5692C1 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR5692C1 Gene

  • MicroRNA 5692c-1 2 3 5
  • Hsa-Mir-5692c-1 3

External Ids for MIR5692C1 Gene

Previous GeneCards Identifiers for MIR5692C1 Gene

  • GC05U901583
  • GC05M135139

Summaries for MIR5692C1 Gene

Entrez Gene Summary for MIR5692C1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5692C1 Gene

MIR5692C1 (MicroRNA 5692c-1) is an RNA Gene, and is affiliated with the miRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5692C1 Gene

Genomics for MIR5692C1 Gene

Genomic Location for MIR5692C1 Gene

Chromosome:
5
Start:
135,802,985 bp from pter
End:
135,803,075 bp from pter
Size:
91 bases
Orientation:
Minus strand

Genomic View for MIR5692C1 Gene

Genes around MIR5692C1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5692C1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5692C1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5692C1 Gene

No data available for Regulatory Elements for MIR5692C1 Gene

Proteins for MIR5692C1 Gene

Post-translational modifications for MIR5692C1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5692C1 Gene

Domains & Families for MIR5692C1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5692C1 Gene

Function for MIR5692C1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5692C1 Gene

Localization for MIR5692C1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5692C1 Gene

Pathways & Interactions for MIR5692C1 Gene

SuperPathways for MIR5692C1 Gene

No Data Available

Interacting Proteins for MIR5692C1 Gene

Gene Ontology (GO) - Biological Process for MIR5692C1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR5692C1 Gene

Transcripts for MIR5692C1 Gene

mRNA/cDNA for MIR5692C1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5692C1 Gene

No ASD Table

Relevant External Links for MIR5692C1 Gene

GeneLoc Exon Structure for
MIR5692C1
ECgene alternative splicing isoforms for
MIR5692C1

Expression for MIR5692C1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR5692C1 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5692C1 Gene:

MIR5692C1
genes like me logo Genes that share expression patterns with MIR5692C1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR5692C1 Gene

Orthologs for MIR5692C1 Gene

Evolution for MIR5692C1 Gene

ENSEMBL:
Gene Tree for MIR5692C1 (if available)
TreeFam:
Gene Tree for MIR5692C1 (if available)

No data available for Orthologs for MIR5692C1 Gene

Paralogs for MIR5692C1 Gene

No data available for Paralogs for MIR5692C1 Gene

Variants for MIR5692C1 Gene

Sequence variations from dbSNP and Humsavar for MIR5692C1 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs1000035649 -- 135,803,529(+) GATAA(C/T)ATTTT intron-variant, upstream-variant-2KB
rs1000638209 -- 135,804,700(+) GTCTG(C/T)GATAT intron-variant, upstream-variant-2KB
rs1001074902 -- 135,805,040(+) TAGTA(C/T)CCTAG intron-variant, upstream-variant-2KB
rs1004651289 -- 135,804,639(+) CTGTG(A/G)TATTA intron-variant, upstream-variant-2KB
rs10062107 -- 135,804,913(+) gtaat(A/G)tccca intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR5692C1 Gene

Variant ID Type Subtype PubMed ID
esv2550693 CNV loss 19546169
nsv1032841 CNV gain 25217958
nsv1077464 CNV duplication 25765185
nsv1118739 CNV duplication 24896259
nsv1141500 CNV duplication 24896259
nsv1150073 CNV duplication 26484159
nsv508380 CNV deletion 20534489
nsv599751 CNV gain 21841781
nsv823244 CNV loss 20364138

Relevant External Links for MIR5692C1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR5692C1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5692C1 Gene

Disorders for MIR5692C1 Gene

Relevant External Links for MIR5692C1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR5692C1

No disorders were found for MIR5692C1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5692C1 Gene

Publications for MIR5692C1 Gene

  1. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A. … Wang Y. (PLoS ONE 2011) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR5692C1 Gene

Sources for MIR5692C1 Gene

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