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Aliases for MIR5692A2 Gene

Subcategory (RNA class) for MIR5692A2 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR5692A2 Gene

  • MicroRNA 5692a-2 2 3 5
  • Hsa-Mir-5692a-2 3

External Ids for MIR5692A2 Gene

Previous GeneCards Identifiers for MIR5692A2 Gene

  • GC08U901605
  • GC08P012580

Summaries for MIR5692A2 Gene

Entrez Gene Summary for MIR5692A2 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5692A2 Gene

MIR5692A2 (MicroRNA 5692a-2) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5692A2 Gene

Genomics for MIR5692A2 Gene

Regulatory Elements for MIR5692A2 Gene

Enhancers for MIR5692A2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around MIR5692A2 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR5692A2 Gene

Chromosome:
8
Start:
12,719,132 bp from pter
End:
12,719,190 bp from pter
Size:
59 bases
Orientation:
Plus strand

Genomic View for MIR5692A2 Gene

Genes around MIR5692A2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5692A2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5692A2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5692A2 Gene

Proteins for MIR5692A2 Gene

Post-translational modifications for MIR5692A2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5692A2 Gene

Domains & Families for MIR5692A2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5692A2 Gene

Function for MIR5692A2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5692A2 Gene

Localization for MIR5692A2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5692A2 Gene

Pathways & Interactions for MIR5692A2 Gene

SuperPathways for MIR5692A2 Gene

No Data Available

Interacting Proteins for MIR5692A2 Gene

Gene Ontology (GO) - Biological Process for MIR5692A2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR5692A2 Gene

Drugs & Compounds for MIR5692A2 Gene

No Compound Related Data Available

Transcripts for MIR5692A2 Gene

mRNA/cDNA for MIR5692A2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5692A2 Gene

No ASD Table

Relevant External Links for MIR5692A2 Gene

GeneLoc Exon Structure for
MIR5692A2
ECgene alternative splicing isoforms for
MIR5692A2

Expression for MIR5692A2 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5692A2 Gene:

MIR5692A2
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR5692A2 Gene

Orthologs for MIR5692A2 Gene

Evolution for MIR5692A2 Gene

ENSEMBL:
Gene Tree for MIR5692A2 (if available)
TreeFam:
Gene Tree for MIR5692A2 (if available)

No data available for Orthologs for MIR5692A2 Gene

Paralogs for MIR5692A2 Gene

No data available for Paralogs for MIR5692A2 Gene

Variants for MIR5692A2 Gene

Sequence variations from dbSNP and Humsavar for MIR5692A2 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs4831763 -- 12,718,352(+) ccctt(A/G)tgatg upstream-variant-2KB
rs56664156 -- 12,718,514(+) GATAT(C/T)ACTCA upstream-variant-2KB
rs57814408 -- 12,718,269(+) GTGTA(C/T)ACTCT upstream-variant-2KB
rs142823187 -- 12,719,426(+) TGACA(-/GAGGGCG)TACAC downstream-variant-500B
rs62486395 -- 12,717,756(+) CACCA(C/T)GTGTG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR5692A2 Gene

Variant ID Type Subtype PubMed ID
dgv154e203 CNV gain+loss 21179565
dgv244e55 CNV gain 17911159
dgv246e55 CNV gain 17911159
dgv7016n100 CNV gain 25217958
dgv7040n100 CNV gain 25217958
dgv7077n100 CNV gain 25217958
dgv7082n100 CNV gain 25217958
esv2759546 CNV loss 17122850
esv2759593 CNV gain+loss 17122850
nsv1025471 CNV gain 25217958
nsv1029648 CNV gain 25217958
nsv1078596 CNV duplication 25765185
nsv1132670 CNV duplication 24896259
nsv428178 CNV gain 18775914
nsv970555 CNV duplication 23825009

Relevant External Links for MIR5692A2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR5692A2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5692A2 Gene

Disorders for MIR5692A2 Gene

Relevant External Links for MIR5692A2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR5692A2

No disorders were found for MIR5692A2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5692A2 Gene

Publications for MIR5692A2 Gene

  1. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A. … Wang Y. (PLoS ONE 2011) 3 65
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 65

Products for MIR5692A2 Gene

Sources for MIR5692A2 Gene

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