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Aliases for MIR5692A1 Gene

Subcategory (RNA class) for MIR5692A1 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR5692A1 Gene

  • MicroRNA 5692a-1 2 3
  • Hsa-Mir-5692a-1 3

External Ids for MIR5692A1 Gene

Summaries for MIR5692A1 Gene

Entrez Gene Summary for MIR5692A1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5692A1 Gene

MIR5692A1 (MicroRNA 5692a-1) is a RNA Gene, and belongs to miRNA RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5692A1 Gene

Genomics for MIR5692A1 Gene

Genomic Location for MIR5692A1 Gene

Start:
97,963,658 bp from pter
End:
97,963,726 bp from pter
Size:
69 bases
Orientation:
Plus strand

Genomic View for MIR5692A1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR5692A1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5692A1 Gene

No data available for Regulatory Elements for MIR5692A1 Gene

Proteins for MIR5692A1 Gene

Post-translational modifications for MIR5692A1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5692A1 Gene

Domains for MIR5692A1 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for MIR5692A1 Gene

Function for MIR5692A1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR5692A1 Gene

Localization for MIR5692A1 Gene

No data available for Gene Ontology (GO) - Cellular Components for MIR5692A1 Gene

Pathways for MIR5692A1 Gene

SuperPathways for MIR5692A1 Gene

No Data Available

Interacting Proteins for MIR5692A1 Gene

Gene Ontology (GO) - Biological Process for MIR5692A1 Gene

None

No data available for Pathways by source for MIR5692A1 Gene

Transcripts for MIR5692A1 Gene

mRNA/cDNA for MIR5692A1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5692A1 Gene

No ASD Table

Relevant External Links for MIR5692A1 Gene

GeneLoc Exon Structure for
MIR5692A1
ECgene alternative splicing isoforms for
MIR5692A1

Expression for MIR5692A1 Gene

No Expression Related Data Available

Orthologs for MIR5692A1 Gene

Evolution for MIR5692A1 Gene

ENSEMBL:
Gene Tree for MIR5692A1 (if available)
TreeFam:
Gene Tree for MIR5692A1 (if available)

No data available for Orthologs for MIR5692A1 Gene

Paralogs for MIR5692A1 Gene

No data available for Paralogs for MIR5692A1 Gene

Variants for MIR5692A1 Gene

Sequence variations from dbSNP and Humsavar for MIR5692A1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs2394815 -- 97,962,246(+) TGTAC(A/G)CCCTG upstream-variant-2KB
rs2894157 -- 97,962,193(+) TTGAT(A/T)TTATT upstream-variant-2KB
rs6465638 -- 97,961,831(+) agttt(C/T)ggggg upstream-variant-2KB
rs10225377 -- 97,963,748(+) tctaa(A/T)atcac downstream-variant-500B
rs11971168 -- 97,963,894(+) gtgtg(C/T)gtacg downstream-variant-500B

Relevant External Links for MIR5692A1 Gene

HapMap Linkage Disequilibrium report
MIR5692A1

No data available for Structural Variations from Database of Genomic Variants (DGV) for MIR5692A1 Gene

Disorders for MIR5692A1 Gene

No disorders were found for MIR5692A1 Gene.

No data available for UniProtKB/Swiss-Prot for MIR5692A1 Gene

Publications for MIR5692A1 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A. … Wang Y. (PLoS ONE 2011) 3

Products for MIR5692A1 Gene

Sources for MIR5692A1 Gene

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