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Aliases for MIR5690 Gene

Subcategory (RNA class) for MIR5690 Gene


Quality Score for this RNA gene is


Aliases for MIR5690 Gene

  • MicroRNA 5690 2 3 5
  • Hsa-Mir-5690 3

External Ids for MIR5690 Gene

Previous GeneCards Identifiers for MIR5690 Gene

  • GC06U902272
  • GC06M035634
  • GC06M035635
  • GC06M035737
  • GC06M035755
  • GC06M036092
  • GC06M036304
  • GC06M036671

Summaries for MIR5690 Gene

Entrez Gene Summary for MIR5690 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5690 Gene

MIR5690 (MicroRNA 5690) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5690 Gene

Genomics for MIR5690 Gene

Regulatory Elements for MIR5690 Gene

Enhancers for MIR5690 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F035662 1 Ensembl ENCODE 0.8 +0.6 589 4.0 BCOR KLF1 ZMYM3 CHAMP1 ZFHX2 SCRT2 MAFK EGR2 SMARCA5 NR3C1 FKBP5 ARMC12 ENSG00000232909 MAPK14 PPARD GC06M037519 MIR5690
GH06F035666 0.9 Ensembl ENCODE 0.8 -4.2 -4212 5.2 BCOR JUN CEBPB CEBPG ZNF664 POLR2A CEBPA ZBTB33 KDM1A MLLT1 FKBP5 ARMC12 ENSG00000232909 MIR5690
GH06F035676 0.9 Ensembl ENCODE 0.4 -12.9 -12948 2.7 PKNOX1 CEBPB MAFG MNT SCRT2 NFE2 ZBTB33 EMSY PRDM1 SP7 ENSG00000212579 FKBP5 ARMC12 ENSG00000232909 MIR5690
GH06F035686 1.1 ENCODE 0.3 -23.0 -23029 3.6 HDGF PKNOX1 MLX WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9 ENSG00000272374 FKBP5 ARMC12 ENSG00000232909 ENSG00000212579 ENSG00000237719 ENSG00000219023 FANCE SRPK1 MAPK14
GH06F035690 0.9 Ensembl ENCODE 0.3 -27.0 -26956 2.1 TGIF2 ATF3 CEBPA MAX ZBTB33 FOXP2 RAD21 YY1 FKBP5 ARMC12 ENSG00000232909 ENSG00000212579 ZNF76 MIR5690
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around MIR5690 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR5690 Gene

35,664,717 bp from pter
35,664,789 bp from pter
73 bases
Minus strand

Genomic View for MIR5690 Gene

Genes around MIR5690 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5690 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5690 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5690 Gene

ORGUL Member Location for MIR5690 Gene

ORGUL Member Location for MIR5690 gene

Proteins for MIR5690 Gene

Post-translational modifications for MIR5690 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5690 Gene

Domains & Families for MIR5690 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5690 Gene

Function for MIR5690 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5690 Gene

Localization for MIR5690 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5690 Gene

Pathways & Interactions for MIR5690 Gene

SuperPathways for MIR5690 Gene

No Data Available

Interacting Proteins for MIR5690 Gene

Gene Ontology (GO) - Biological Process for MIR5690 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR5690 Gene

Transcripts for MIR5690 Gene

mRNA/cDNA for MIR5690 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5690 Gene

No ASD Table

Relevant External Links for MIR5690 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR5690 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR5690 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5690 Gene:

genes like me logo Genes that share expression patterns with MIR5690: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR5690 Gene

Orthologs for MIR5690 Gene

Evolution for MIR5690 Gene

Gene Tree for MIR5690 (if available)
Gene Tree for MIR5690 (if available)

No data available for Orthologs for MIR5690 Gene

Paralogs for MIR5690 Gene

No data available for Paralogs for MIR5690 Gene

Variants for MIR5690 Gene

Sequence variations from dbSNP and Humsavar for MIR5690 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs111393909 -- 35,666,746(+) TAGCC(A/G)GGCAT intron-variant, upstream-variant-2KB
rs11347868 -- 35,664,290(+) AGCTG(-/T)TTTTT intron-variant, downstream-variant-500B
rs115871276 -- 35,666,262(+) AGGGC(A/G)AATTT intron-variant, upstream-variant-2KB
rs12213129 -- 35,666,621(+) cacgg(G/T)ggctc intron-variant, upstream-variant-2KB
rs13192954 -- 35,665,679(+) ACACT(A/G)TGGGT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR5690 Gene

Variant ID Type Subtype PubMed ID
esv2759420 CNV gain 17122850
esv3608689 CNV gain 21293372
nsv508403 CNV deletion 20534489
nsv5258 CNV deletion 18451855
nsv602924 CNV gain 21841781
nsv821646 CNV loss 15273396

Relevant External Links for MIR5690 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5690 Gene

Disorders for MIR5690 Gene

Relevant External Links for MIR5690

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR5690 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5690 Gene

Publications for MIR5690 Gene

  1. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A. … Wang Y. (PLoS ONE 2011) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR5690 Gene

Sources for MIR5690 Gene

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