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Aliases for MIR5688 Gene

Subcategory (RNA class) for MIR5688 Gene


Quality Score for this RNA gene is


Aliases for MIR5688 Gene

  • MicroRNA 5688 2 3 5
  • Hsa-Mir-5688 3

External Ids for MIR5688 Gene

Previous GeneCards Identifiers for MIR5688 Gene

  • GC03U901826

Summaries for MIR5688 Gene

Entrez Gene Summary for MIR5688 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5688 Gene

MIR5688 (MicroRNA 5688) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5688 Gene

Genomics for MIR5688 Gene

Genomic Location for MIR5688 Gene

85,385,710 bp from pter
85,385,792 bp from pter
83 bases
Plus strand

Genomic View for MIR5688 Gene

Genes around MIR5688 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5688 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5688 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5688 Gene

No data available for Regulatory Elements for MIR5688 Gene

Proteins for MIR5688 Gene

Post-translational modifications for MIR5688 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5688 Gene

Domains & Families for MIR5688 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5688 Gene

Function for MIR5688 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5688 Gene

Localization for MIR5688 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5688 Gene

Pathways & Interactions for MIR5688 Gene

SuperPathways for MIR5688 Gene

No Data Available

Interacting Proteins for MIR5688 Gene

Gene Ontology (GO) - Biological Process for MIR5688 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR5688 Gene

Transcripts for MIR5688 Gene

mRNA/cDNA for MIR5688 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5688 Gene

No ASD Table

Relevant External Links for MIR5688 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR5688 Gene

mRNA expression in normal human tissues for MIR5688 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5688 Gene:

genes like me logo Genes that share expression patterns with MIR5688: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR5688 Gene

Orthologs for MIR5688 Gene

Evolution for MIR5688 Gene

Gene Tree for MIR5688 (if available)
Gene Tree for MIR5688 (if available)

No data available for Orthologs for MIR5688 Gene

Paralogs for MIR5688 Gene

No data available for Paralogs for MIR5688 Gene

Variants for MIR5688 Gene

Sequence variations from dbSNP and Humsavar for MIR5688 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs10538607 -- 85,384,222(+) TATGT(-/AG)AGAGT intron-variant, upstream-variant-2KB
rs112837334 -- 85,385,296(+) AGAAA(C/T)AATGA intron-variant, upstream-variant-2KB
rs113623210 -- 85,384,259(+) GCTGA(A/T)ATGCA intron-variant, upstream-variant-2KB
rs113760846 -- 85,385,652(+) AATAT(A/T)TTCTT intron-variant, upstream-variant-2KB
rs115496152 -- 85,385,373(+) AATGT(A/G)TAGAT intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for MIR5688 Gene

Variant ID Type Subtype PubMed ID
esv3596835 CNV loss 21293372
esv3596839 CNV loss 21293372

Relevant External Links for MIR5688 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5688 Gene

Disorders for MIR5688 Gene

Relevant External Links for MIR5688

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR5688 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5688 Gene

Publications for MIR5688 Gene

  1. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A. … Wang Y. (PLoS ONE 2011) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR5688 Gene

Sources for MIR5688 Gene

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