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Aliases for MIR5684 Gene

Subcategory (RNA class) for MIR5684 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR5684 Gene

  • MicroRNA 5684 2 3
  • Hsa-Mir-5684 3

External Ids for MIR5684 Gene

Previous GeneCards Identifiers for MIR5684 Gene

  • GC19U901585
  • GC19P012898

Summaries for MIR5684 Gene

Entrez Gene Summary for MIR5684 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5684 Gene

MIR5684 (MicroRNA 5684) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5684 Gene

Genomics for MIR5684 Gene

Genomic Location for MIR5684 Gene

Chromosome:
19
Start:
12,787,128 bp from pter
End:
12,787,192 bp from pter
Size:
65 bases
Orientation:
Plus strand

Genomic View for MIR5684 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR5684 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5684 Gene

No data available for Regulatory Elements for MIR5684 Gene

Proteins for MIR5684 Gene

Post-translational modifications for MIR5684 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5684 Gene

Domains & Families for MIR5684 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5684 Gene

Function for MIR5684 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5684 Gene

Localization for MIR5684 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5684 Gene

Pathways & Interactions for MIR5684 Gene

SuperPathways for MIR5684 Gene

No Data Available

Interacting Proteins for MIR5684 Gene

Gene Ontology (GO) - Biological Process for MIR5684 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR5684 Gene

Drugs & Compounds for MIR5684 Gene

No Compound Related Data Available

Transcripts for MIR5684 Gene

mRNA/cDNA for MIR5684 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5684 Gene

No ASD Table

Relevant External Links for MIR5684 Gene

GeneLoc Exon Structure for
MIR5684
ECgene alternative splicing isoforms for
MIR5684

Expression for MIR5684 Gene

No Expression Related Data Available

Primer Products

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for MIR5684 Gene

Orthologs for MIR5684 Gene

Evolution for MIR5684 Gene

ENSEMBL:
Gene Tree for MIR5684 (if available)
TreeFam:
Gene Tree for MIR5684 (if available)

No data available for Orthologs for MIR5684 Gene

Paralogs for MIR5684 Gene

No data available for Paralogs for MIR5684 Gene

Variants for MIR5684 Gene

Sequence variations from dbSNP and Humsavar for MIR5684 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs2599482 -- 12,786,710(+) CGGCT(A/G)TACCA upstream-variant-2KB
rs2607355 -- 12,786,708(-) GTACA(C/G)CCGGT upstream-variant-2KB
rs7250961 -- 12,787,002(+) gtctc(A/G)ataaa upstream-variant-2KB
rs7254552 -- 12,787,469(+) ctact(A/G)aaaat downstream-variant-500B
rs8107206 -- 12,787,493(+) ctggc(A/G)tggtg downstream-variant-500B

Relevant External Links for MIR5684 Gene

HapMap Linkage Disequilibrium report
MIR5684

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR5684 Gene

Disorders for MIR5684 Gene

Relevant External Links for MIR5684

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR5684
genes like me logo Genes that share disorders with MIR5684: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5684 Gene

Publications for MIR5684 Gene

  1. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A. … Wang Y. (PLoS ONE 2011) 67
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 67

Products for MIR5684 Gene

Sources for MIR5684 Gene

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