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Aliases for MIR5682 Gene

Subcategory (RNA class) for MIR5682 Gene


Quality Score for this RNA gene is


Aliases for MIR5682 Gene

  • MicroRNA 5682 2 3 5
  • Hsa-Mir-5682 3

External Ids for MIR5682 Gene

Previous GeneCards Identifiers for MIR5682 Gene

  • GC03U901817
  • GC03P120770

Summaries for MIR5682 Gene

Entrez Gene Summary for MIR5682 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5682 Gene

MIR5682 (MicroRNA 5682) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5682 Gene

Genomics for MIR5682 Gene

Genomic Location for MIR5682 Gene

121,049,640 bp from pter
121,049,715 bp from pter
76 bases
Plus strand

Genomic View for MIR5682 Gene

Genes around MIR5682 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5682 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5682 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5682 Gene

No data available for Regulatory Elements for MIR5682 Gene

Proteins for MIR5682 Gene

Post-translational modifications for MIR5682 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5682 Gene

Domains & Families for MIR5682 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5682 Gene

Function for MIR5682 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5682 Gene

Localization for MIR5682 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR5682 Gene

Pathways & Interactions for MIR5682 Gene

SuperPathways for MIR5682 Gene

No Data Available

Interacting Proteins for MIR5682 Gene

Gene Ontology (GO) - Biological Process for MIR5682 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR5682 Gene

Transcripts for MIR5682 Gene

mRNA/cDNA for MIR5682 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5682 Gene

No ASD Table

Relevant External Links for MIR5682 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR5682 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5682 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR5682 Gene

Orthologs for MIR5682 Gene

Evolution for MIR5682 Gene

Gene Tree for MIR5682 (if available)
Gene Tree for MIR5682 (if available)

No data available for Orthologs for MIR5682 Gene

Paralogs for MIR5682 Gene

No data available for Paralogs for MIR5682 Gene

Variants for MIR5682 Gene

Sequence variations from dbSNP and Humsavar for MIR5682 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs111869942 -- 121,050,214(+) CTACT(A/C)AGCTA intron-variant, downstream-variant-500B
rs113512539 -- 121,050,030(+) ACTCC(G/T)CTGGC intron-variant, downstream-variant-500B
rs114209660 -- 121,049,373(+) TCTAG(A/G)TCAGG intron-variant, upstream-variant-2KB
rs11444329 -- 121,048,689(+) TTTTT(-/T)AAGAC intron-variant, upstream-variant-2KB
rs116570957 -- 121,049,795(+) AGCTG(C/T)ATCTG intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for MIR5682 Gene

Variant ID Type Subtype PubMed ID
esv3597587 CNV gain 21293372
nsv1005525 CNV loss 25217958
nsv1005551 CNV gain 25217958

Relevant External Links for MIR5682 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5682 Gene

Disorders for MIR5682 Gene

Relevant External Links for MIR5682

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for MIR5682 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5682 Gene

Publications for MIR5682 Gene

  1. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A. … Wang Y. (PLoS ONE 2011) 3 64
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64

Products for MIR5682 Gene

Sources for MIR5682 Gene

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