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Aliases for MIR5681A Gene

Subcategory (RNA class) for MIR5681A Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR5681A Gene

  • MicroRNA 5681a 2 3
  • Hsa-Mir-5681a 3

External Ids for MIR5681A Gene

Summaries for MIR5681A Gene

Entrez Gene Summary for MIR5681A Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5681A Gene

MIR5681A (MicroRNA 5681a) is a RNA Gene, and belongs to miRNA RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5681A Gene

Genomics for MIR5681A Gene

Genomic Location for MIR5681A Gene

Start:
74,548,543 bp from pter
End:
74,548,617 bp from pter
Size:
75 bases
Orientation:
Plus strand

Genomic View for MIR5681A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR5681A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5681A Gene

No data available for Regulatory Elements for MIR5681A Gene

Proteins for MIR5681A Gene

Post-translational modifications for MIR5681A Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5681A Gene

Domains for MIR5681A Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for MIR5681A Gene

Function for MIR5681A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR5681A Gene

Localization for MIR5681A Gene

No data available for Gene Ontology (GO) - Cellular Components for MIR5681A Gene

Pathways for MIR5681A Gene

SuperPathways for MIR5681A Gene

No Data Available

Interacting Proteins for MIR5681A Gene

Gene Ontology (GO) - Biological Process for MIR5681A Gene

None

No data available for Pathways by source for MIR5681A Gene

Transcripts for MIR5681A Gene

mRNA/cDNA for MIR5681A Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5681A Gene

No ASD Table

Relevant External Links for MIR5681A Gene

GeneLoc Exon Structure for
MIR5681A
ECgene alternative splicing isoforms for
MIR5681A

Expression for MIR5681A Gene

No Expression Related Data Available

Orthologs for MIR5681A Gene

Evolution for MIR5681A Gene

ENSEMBL:
Gene Tree for MIR5681A (if available)
TreeFam:
Gene Tree for MIR5681A (if available)

No data available for Orthologs for MIR5681A Gene

Paralogs for MIR5681A Gene

No data available for Paralogs for MIR5681A Gene

Variants for MIR5681A Gene

Sequence variations from dbSNP and Humsavar for MIR5681A Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs6472862 -- 74,547,684(+) TCTGA(C/G)CTCAA upstream-variant-2KB
rs7011303 -- 74,546,939(+) GAATC(C/T)AGCAG upstream-variant-2KB
rs34161707 -- 74,546,601(+) AATAA(-/G)GAGTA upstream-variant-2KB
rs59332908 -- 74,547,924(+) GTTTC(A/G)GATCC upstream-variant-2KB
rs61097586 -- 74,546,888(+) AAAAG(-/GG)CAGTG upstream-variant-2KB

Relevant External Links for MIR5681A Gene

HapMap Linkage Disequilibrium report
MIR5681A

No data available for Structural Variations from Database of Genomic Variants (DGV) for MIR5681A Gene

Disorders for MIR5681A Gene

No disorders were found for MIR5681A Gene.

No data available for UniProtKB/Swiss-Prot for MIR5681A Gene

Publications for MIR5681A Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A. … Wang Y. (PLoS ONE 2011) 3

Products for MIR5681A Gene

Sources for MIR5681A Gene

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