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Aliases for MIR567 Gene

Subcategory (RNA class) for MIR567 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR567 Gene

  • MicroRNA 567 2 3 5
  • Hsa-Mir-567 3
  • MIRN567 3

External Ids for MIR567 Gene

ORGUL Members for MIR567 Gene

Previous HGNC Symbols for MIR567 Gene

  • MIRN567

Previous GeneCards Identifiers for MIR567 Gene

  • GC03U901155
  • GC03P113316
  • GC03P111831

Summaries for MIR567 Gene

Entrez Gene Summary for MIR567 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR567 Gene

MIR567 (MicroRNA 567) is an RNA Gene, and is affiliated with the miRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR567 Gene

Genomics for MIR567 Gene

Regulatory Elements for MIR567 Gene

Enhancers for MIR567 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F112136 1.2 Ensembl ENCODE 12.1 +24.6 24626 1.9 HDGF TBP CTCF MXI1 PKNOX1 TBL1XR1 MAX BMI1 RAD21 RELA SLC9C1 MIR567 C3orf52 CD200 GCSAM LOC100420831
GH03F112089 1 Ensembl ENCODE 11.8 -21.0 -21020 3.6 INSM2 KLF17 FEZF1 GLIS2 ZNF366 SCRT2 ZNF391 FOS ZNF362 SP3 ENSG00000261488 LINC02042 ENSG00000239311 MIR567 CD200R1L PLCXD2-AS1 ABHD10 C3orf52 GC03P112114
GH03F112553 0.5 Ensembl 11.3 +441.2 441200 1.2 HDGF SLC35A5 MIR567 C3orf52 CD200 ENSG00000279349
GH03F112514 0.8 Ensembl 11.2 +402.0 401999 0.6 SRF MTA2 USF2 JUNB EBF1 TBX21 RELA RAD51 CBX5 ELK1 SLC35A5 CD200 MIR567 C3orf52 SLC9C1 OR7E100P BTLA
GH03F112519 0.2 ENCODE 11.2 +406.8 406788 0.2 CTCF ZNF654 TRIM22 REST RAD21 GATA3 STAT3 SMC3 MLLT1 CD200 MIR567 C3orf52 SLC9C1 OR7E100P BTLA
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around MIR567 on UCSC Golden Path with GeneCards custom track

Genomic Location for MIR567 Gene

Chromosome:
3
Start:
112,112,801 bp from pter
End:
112,112,898 bp from pter
Size:
98 bases
Orientation:
Plus strand

Genomic View for MIR567 Gene

Genes around MIR567 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR567 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR567 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR567 Gene

Proteins for MIR567 Gene

Post-translational modifications for MIR567 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR567 Gene

Domains & Families for MIR567 Gene

Gene Families for MIR567 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR567: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR567 Gene

Function for MIR567 Gene

Animal Model Products

miRNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR567 Gene

Localization for MIR567 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR567 Gene

Pathways & Interactions for MIR567 Gene

SuperPathways for MIR567 Gene

No Data Available

Interacting Proteins for MIR567 Gene

Gene Ontology (GO) - Biological Process for MIR567 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR567 Gene

Transcripts for MIR567 Gene

mRNA/cDNA for MIR567 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR567 Gene

No ASD Table

Relevant External Links for MIR567 Gene

GeneLoc Exon Structure for
MIR567
ECgene alternative splicing isoforms for
MIR567

Expression for MIR567 Gene

mRNA expression in normal human tissues for MIR567 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR567 Gene:

MIR567
genes like me logo Genes that share expression patterns with MIR567: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for MIR567 Gene

Orthologs for MIR567 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR567 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-567 35
  • 94 (a)
OneToOne
Species where no ortholog for MIR567 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR567 Gene

ENSEMBL:
Gene Tree for MIR567 (if available)
TreeFam:
Gene Tree for MIR567 (if available)

Paralogs for MIR567 Gene

No data available for Paralogs for MIR567 Gene

Variants for MIR567 Gene

Sequence variations from dbSNP and Humsavar for MIR567 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs111954756 -- 112,113,062(+) GCTGG(C/G)CATTT intron-variant, nc-transcript-variant, downstream-variant-500B, reference, missense
rs113312878 -- 112,111,353(+) GTGGG(A/G)GGCGG intron-variant, upstream-variant-2KB
rs113697133 -- 112,111,808(+) TTTTT(-/T)GGCCC intron-variant, upstream-variant-2KB
rs113700511 -- 112,111,506(+) CTGAA(A/G)GTTGC intron-variant, upstream-variant-2KB
rs115676771 -- 112,112,794(+) ATCTA(C/T)GGAAG intron-variant, upstream-variant-2KB

Relevant External Links for MIR567 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR567

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR567 Gene

Disorders for MIR567 Gene

Relevant External Links for MIR567

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
MIR567

No disorders were found for MIR567 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR567 Gene

Publications for MIR567 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3 64
  2. The colorectal microRNAome. (PMID: 16505370) Cummins J.M. … Velculescu V.E. (Proc. Natl. Acad. Sci. U.S.A. 2006) 3 64

Products for MIR567 Gene

Sources for MIR567 Gene

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