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Aliases for MIR555 Gene

Subcategory (RNA class) for MIR555 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR555 Gene

  • MicroRNA 555 2 3
  • Hsa-Mir-555 3
  • MIRN555 3

External Ids for MIR555 Gene

Previous Symbols for MIR555 Gene

  • MIRN555

Summaries for MIR555 Gene

Entrez Gene Summary for MIR555 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR555 Gene

MIR555 (MicroRNA 555) is an RNA Gene, and belongs to the miRNA class.

fRNAdb sequence ontologies for MIR555 Gene

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

View fRNAdb secondary structures for MIR555

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for MIR555 Gene

Genomics for MIR555 Gene

Genomic Location for MIR555 Gene

Start:
155,346,350 bp from pter
End:
155,346,445 bp from pter
Size:
96 bases
Orientation:
Minus strand

Genomic View for MIR555 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR555 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR555 Gene

ORGUL Member Location for MIR555 Gene

ORGUL Member Location for MIR555 gene

No data available for Regulatory Elements for MIR555 Gene

Proteins for MIR555 Gene

Post-translational modifications for MIR555 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR555 Gene

Domains for MIR555 Gene

Gene Families for MIR555 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR555: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR555 Gene

Function for MIR555 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR555 Gene

Localization for MIR555 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for MIR555 Gene

Pathways for MIR555 Gene

SuperPathways for MIR555 Gene

No Data Available

Interacting Proteins for MIR555 Gene

Gene Ontology (GO) - Biological Process for MIR555 Gene

None

No data available for Pathways by source for MIR555 Gene

Transcripts for MIR555 Gene

fRNAdb Secondary structures for MIR555 Gene

  • hsa-mir-555_MI0003561_Homo_sapiens_miR-555_stem-loop_hairpin

mRNA/cDNA for MIR555 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR555 Gene

No ASD Table

Relevant External Links for MIR555 Gene

GeneLoc Exon Structure for
MIR555
ECgene alternative splicing isoforms for
MIR555

Expression for MIR555 Gene

mRNA expression in normal human tissues for MIR555 Gene

genes like me logo Genes that share expressions with MIR555: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for MIR555 Gene

Orthologs for MIR555 Gene

Evolution for MIR555 Gene

ENSEMBL:
Gene Tree for MIR555 (if available)
TreeFam:
Gene Tree for MIR555 (if available)

No data available for Orthologs for MIR555 Gene

Paralogs for MIR555 Gene

No data available for Paralogs for MIR555 Gene

Variants for MIR555 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR555 Gene

Variant ID Type Subtype PubMed ID
nsv831636 CNV Loss 17160897
esv33869 CNV Loss 17666407

Relevant External Links for MIR555 Gene

HapMap Linkage Disequilibrium report
MIR555

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for MIR555 Gene

Disorders for MIR555 Gene

No disorders were found for MIR555 Gene.

No data available for UniProtKB/Swiss-Prot for MIR555 Gene

Publications for MIR555 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. The colorectal microRNAome. (PMID: 16505370) Cummins J.M. … Velculescu V.E. (Proc. Natl. Acad. Sci. U.S.A. 2006) 3

Products for MIR555 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate MIR555
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for MIR555
    • Block miRNA regulation of MIR555 using miScript Target Protectors

    Sources for MIR555 Gene

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