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Aliases for MIR550B1 Gene

Subcategory (RNA class) for MIR550B1 Gene

miRNA

Quality Score for this RNA gene is

2

Aliases for MIR550B1 Gene

  • MicroRNA 550b-1 2 3
  • Hsa-Mir-550b-1 3

External Ids for MIR550B1 Gene

Summaries for MIR550B1 Gene

Entrez Gene Summary for MIR550B1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR550B1 Gene

MIR550B1 (MicroRNA 550b-1) is a RNA Gene, and belongs to miRNA RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR550B1 Gene

Genomics for MIR550B1 Gene

Genomic Location for MIR550B1 Gene

Start:
30,289,794 bp from pter
End:
30,289,890 bp from pter
Size:
97 bases
Orientation:
Minus strand

Genomic View for MIR550B1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for MIR550B1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR550B1 Gene

No data available for Regulatory Elements for MIR550B1 Gene

Proteins for MIR550B1 Gene

Post-translational modifications for MIR550B1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR550B1 Gene

Domains for MIR550B1 Gene

Gene Families for MIR550B1 Gene

HGNC:
  • MIR :ncRNAs / Micro RNAs
genes like me logo Genes that share domains with MIR550B1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for MIR550B1 Gene

Function for MIR550B1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for MIR550B1 Gene

Localization for MIR550B1 Gene

No data available for Gene Ontology (GO) - Cellular Components for MIR550B1 Gene

Pathways for MIR550B1 Gene

SuperPathways for MIR550B1 Gene

No Data Available

Interacting Proteins for MIR550B1 Gene

Gene Ontology (GO) - Biological Process for MIR550B1 Gene

None

No data available for Pathways by source for MIR550B1 Gene

Transcripts for MIR550B1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for MIR550B1 Gene

No ASD Table

Relevant External Links for MIR550B1 Gene

GeneLoc Exon Structure for
MIR550B1
ECgene alternative splicing isoforms for
MIR550B1

No data available for mRNA/cDNA for MIR550B1 Gene

Expression for MIR550B1 Gene

No Expression Related Data Available

Orthologs for MIR550B1 Gene

No data available for Orthologs and Evolution for MIR550B1 Gene

Paralogs for MIR550B1 Gene

No data available for Paralogs for MIR550B1 Gene

Variants for MIR550B1 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR550B1 Gene

Variant ID Type Subtype PubMed ID
nsv436557 CNV Deletion 17901297

Relevant External Links for MIR550B1 Gene

HapMap Linkage Disequilibrium report
MIR550B1

No data available for Sequence variations from dbSNP and Humsavar for MIR550B1 Gene

Disorders for MIR550B1 Gene

No disorders were found for MIR550B1 Gene.

No data available for UniProtKB/Swiss-Prot for MIR550B1 Gene

Publications for MIR550B1 Gene

  1. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S. … Enright A.J. (Nucleic Acids Res. 2006) 3
  2. Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls. (PMID: 20459774) Witten D. … Lui W.O. (BMC Biol. 2010) 3

Products for MIR550B1 Gene

Sources for MIR550B1 Gene

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